Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01221 ATGGCACCTGTACCTCCTTTTGAAGACAAGCATTTGAGGGATGTATTTAAACTTATTATTAGTTTGTTTGAGGATCTTGCTGATACCGCAAGTCCATTCTTTTCAAAAAGGATTAAAGTATTGGAGACAATGGCTCAATTAAAGTGTTGTGTGATAATGCTGGAGATTGACTGCATAGACCTGGTTCTCGAGATGTTCAATATTTTCTTCTCAGTTGTGAGAGATGAACACCTTTTGATTAGTTCCATGACTTCTATAATGATAAACATTTTGAACGAGAGTGAGGAGGCTTTTCAGCAACTATTGGAAGTGATTTTACAAAATCTTATAATGCAAAAAAATGATGCAATTTTTGCTGCTGATAAACTTGCTGCATCGGTCATCAAAACTTGTGCGGATGAGCTGAACCCCCTTATTTGTGCGTTTTTAACAACTTGCATACACGACAGAGATGCTATGGGTAGTGAGCTTAAAGAATATTACTATGAAATTTTCTCTAAAGTTTTCCAGTGTGCGCCTCAGATGCTTCTTGCTGTCAGCCCAAGCTTAATTAAAGAATTATCGGCTGATGAGGTTGATGTTCGGATAAAAGCTGTAAATTTGGTGGGGAAGATTTTTGCACTTCAACATCATGTTGCTAAGAAGTATCATGAGCTTTTCGTGGAGTTTTTGAAGAGATTTTCTGATAAATCTGTGGATGTTAGGATTAGTGCTCTACAATGTGCTAAAGCTTTTTATTTAGCAAATCCTTATGGGACAGAATCATGTGAAATTATGACTTCTGTTGAAGATCGATTATTAGACTCTGATGACCAAGTGAGAAAGCAGGCAGTTCTTGTTGCCTGTGATATTTTTAGTTCAAACCTAAAACTTGTTTCATCCAAACTACTATCTCAAGCCACCGAAAGACTCCGGGATATAAAGATAACTGTTAGAAAGAGTGCCTTGCAAAAGTTGATAAAGGTATATCGAGATTACTGCAAGAAATGTTATGAAGGCAGCATGACAATTAGTGATCATTTCGAAGAGATTCCATGTAAAATTATGATGCTGTGCTATGATAAAGATTGTAAGGAGTTCAGGTTCCAGAACATGGAATTTGTTCTTGCTAATGATCTATTCCCTGAGGATCTTTCGGTTGAGGAAAGGACAAACCATTGGATACACATGTTTTCTCTTTTCAGTTTTCCTCATGAAAAGGCACTGGATACTATTTTGACTCAAAAGAGAAGGTTCCAAAATGAAATGAAAAGCTATTTGGCTATGCGGAAGAAATTGAAGGAAATTTCTCCAGAAGAAACGCAGAAGAAGATTGAAGTTATGTTTACAAAAATGGCAGCATCCTTCCCGGATTCTCACAAAGCTGAAGAGTGTCTGCATAAGTTAAACCAAATTAAAGATAATAGCGTGTTTAAATTACTTGAGAAATTGTTGGAGGAACAAGCCTTCACCACGATTGGACAAACTATGAAAGATAAACATCTGGTAATGATTGGAGACAGCAATCCAAATTATGAGTTTTTACGTCCACTCTTCTCCAAATGTTCATCCAACATTTTCAGCTCAGAGCATGTTAAATGTATCTTAGATTATCTTTCCAAAAATGAAAATGGAATTAAGGATTTGGAGGATTCTTCTGCAAATCTTCTGCTGGCTATTGTGCGAAATTTCCCCTCTATGCTGAAAGGCTTGGAAAAGCAGTTCCAAAAGTTGTTGGAACAGAAAAGTCCTGTTAATGACAAGCTGATTGAGGTCATAGCAAAGGCAGGCTCTCACATGTCTTTCAATCATAGTGATATTTATCCATTTCTAAAGAGAATTTGCTTGGATGGAGCTCGCAGACAGGCCAAATTTGCAGTGTCTGCAATTGCTGCTTTAAGTTTTGAACAATCAGTTTTCAGAAAGTTATATGAGGAGCTAGTTGATTCTTTATATAGCAAGCGGAATGTCCCTACTATTTTGCAATCTCTGGGATGCATTGCACAATACTCTGCTTCTAATTTTGAAACTCGAGTTGAAGAGATCACATCATATATATGCCAGAAGATCATTCAAGTACTTGAATTTAACAATAAATTGTCTTGCATGTTTAATTTATTGTGCCAGAACACTGATGATGGTCATGATGCGACATCCTTTCATGATACTTCTCAATGTAGCGAATCTTGTCAATTAAAGATTTATGGGCTGAAAACACTGGTGAAGATTTCTTTGCATTATGAAGGGAGCCATGTCAAGCATAATATTAATGGATTGTTGGACATTTTGTCAAGAATGCTACGTGAAAGTGATAATTTCATTAGTATAGCTACTGGCTCATGTGAAAATGATAAGGCTCATATCAGATTAGCTGCTGCAAAGGCAATTCTTCGTCTTGCTAGGAAGTGGGATTTACATATTACTCCAGAGATTTTTCAATTCACTATATTGATTGCAAAGGACTCGTCTTTCTTTGTTAGGAGCACATTTCTTAGTAAGATACAAAAGTTGTTGAAGGAGCATAAACTACCAATCAGATTTGCTTGTGCTTTTGCTTTGGCAGTAACAGATTGCATTGACGATCTGCAATATCAGAACTATAAATATATTACAGAGTTTATAAAGGATTACAGTATAGTAGCTCGTAAACAACAAACTTCTGCTGTTCAAGGAGCCATCATTGATTACCCAGCCTACATTTTGGTCTTCTTGATTCATGTTCTTGCTCGGAATAATGACTTTCCATTTGAAGTCTCTCAAGATGAAAAAATGTATGCTGACCTTTGCAGTCCACTTTTCTTTATCCTGCAGGCATTAGTTGACAAGAGTATTGTTGATGGTGACCTGGACATCGTTAATAATGCTGTCCTACATGTAGTTAGTATTTTGCGAGCAATCAGAAAGGTTGAGGATGCTGTTGATGCGCAGATGACACCTAAGCTGCATATGCTGGCTGAAATTGGGATATTTACTTTAAACAAATTAAATCATAGTGGAATTTCTGTATTGCAAACACCTGGACAAATTTTATTGCCTTCGTCATTATATAGAGCGAGTCTCATTAAGAATGATACTAGTTCAAAATGTCCGAAGTCCTTTTTTGATGAAAATTTTCTAAGTAGAGTCTTTCATGCACTTAAGGAATCTACTCTGCCTCATGGATATGCTCAAAAGACTGCAAAAGCACTTCCTAAGCATGGTCATAAGGGTCAACAGGATGTTAAAAAGTCTAATGTTAATATTTATGGTGTACTGGACTTGGCATCTAGCAAACCGGATGATTTCTCAAGGAGAGAAATAGCAAATGCTAAAACTGTGAGGCCAAACATCCCTTCGGTGAAAAGGAGAAAATGTGTGCCTATGTCTGGTTCTGGATCTGTTGGTTTGCATGAATGCTCTACGATTGAGAAGCAACAAAAAATGGCATCAAAACATTGTGGAAAGACAATAGAGAGAAACATGCTTTCATCAAGTGATTCTGTGCGCCCTCAGGGTTCTCTGTCTGAATCACATGTGCCAACCCATAAATCAAAAAGAACTGCTGCTTGTTCGTCGGAGAATGCTGTGACAAGTAGCAAACATACTGCTGAACCTTTCAAATGTCGTAGAACCAAACAGAAAGATACATGTGGCTCAAAGAAACAAGAAATACTAGAAGATGTTTCAAATAAAAATCATTTCAGCCTCCGTGAACCTGGTGATAATTCTTCTCTCGGTAGTATAAGAACTGTTACAAGAAGCTTAGCTGCCAAAGAGGGAACACCACTGAATAAAGAAAATACAAATGTAAATGAAAGGGGAAAATGTACAGAGACATCAGCTTCAGAAGTTATGAATACAAATGCATATGCTGTTAGAAGAACAAGACGGAAAGTATAA 3858 0.3694 MAPVPPFEDKHLRDVFKLIISLFEDLADTASPFFSKRIKVLETMAQLKCCVIMLEIDCIDLVLEMFNIFFSVVRDEHLLISSMTSIMINILNESEEAFQQLLEVILQNLIMQKNDAIFAADKLAASVIKTCADELNPLICAFLTTCIHDRDAMGSELKEYYYEIFSKVFQCAPQMLLAVSPSLIKELSADEVDVRIKAVNLVGKIFALQHHVAKKYHELFVEFLKRFSDKSVDVRISALQCAKAFYLANPYGTESCEIMTSVEDRLLDSDDQVRKQAVLVACDIFSSNLKLVSSKLLSQATERLRDIKITVRKSALQKLIKVYRDYCKKCYEGSMTISDHFEEIPCKIMMLCYDKDCKEFRFQNMEFVLANDLFPEDLSVEERTNHWIHMFSLFSFPHEKALDTILTQKRRFQNEMKSYLAMRKKLKEISPEETQKKIEVMFTKMAASFPDSHKAEECLHKLNQIKDNSVFKLLEKLLEEQAFTTIGQTMKDKHLVMIGDSNPNYEFLRPLFSKCSSNIFSSEHVKCILDYLSKNENGIKDLEDSSANLLLAIVRNFPSMLKGLEKQFQKLLEQKSPVNDKLIEVIAKAGSHMSFNHSDIYPFLKRICLDGARRQAKFAVSAIAALSFEQSVFRKLYEELVDSLYSKRNVPTILQSLGCIAQYSASNFETRVEEITSYICQKIIQVLEFNNKLSCMFNLLCQNTDDGHDATSFHDTSQCSESCQLKIYGLKTLVKISLHYEGSHVKHNINGLLDILSRMLRESDNFISIATGSCENDKAHIRLAAAKAILRLARKWDLHITPEIFQFTILIAKDSSFFVRSTFLSKIQKLLKEHKLPIRFACAFALAVTDCIDDLQYQNYKYITEFIKDYSIVARKQQTSAVQGAIIDYPAYILVFLIHVLARNNDFPFEVSQDEKMYADLCSPLFFILQALVDKSIVDGDLDIVNNAVLHVVSILRAIRKVEDAVDAQMTPKLHMLAEIGIFTLNKLNHSGISVLQTPGQILLPSSLYRASLIKNDTSSKCPKSFFDENFLSRVFHALKESTLPHGYAQKTAKALPKHGHKGQQDVKKSNVNIYGVLDLASSKPDDFSRREIANAKTVRPNIPSVKRRKCVPMSGSGSVGLHECSTIEKQQKMASKHCGKTIERNMLSSSDSVRPQGSLSESHVPTHKSKRTAACSSENAVTSSKHTAEPFKCRRTKQKDTCGSKKQEILEDVSNKNHFSLREPGDNSSLGSIRTVTRSLAAKEGTPLNKENTNVNERGKCTETSASEVMNTNAYAVRRTRRKV 1285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01221 1285 CDD PDS5 1 558 - -
Pumo9g01221 1285 MobiDBLite consensus disorder prediction 1147 1189 - -
Pumo9g01221 1285 Gene3D - 144 351 IPR011989 -
Pumo9g01221 1285 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 2 1200 IPR039776 GO:0007064
Pumo9g01221 1285 SUPERFAMILY ARM repeat 92 890 IPR016024 -
Pumo9g01221 1285 Gene3D - 505 870 IPR011989 -
Pumo9g01221 1285 Pfam Sister chromatid cohesion protein PDS5 protein 1 1010 - -
Pumo9g01221 1285 Coils Coil 409 429 - -
Pumo9g01221 1285 MobiDBLite consensus disorder prediction 1147 1187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01221 Pumo-Chr9 36523246 36560779 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01221 K11267 - gmx:100777822 2258.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01221 9 36523246 36560779 Pumo9g01221 9 36523246 36560779 ECH