Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01216 ATGGAGTTTCCTAGCATTACCAAGTTTCACATCCCACTTGTGTCTTCTTCTCTAGTGCTTTTATGTATTGCTACCACAATACTACTGAACCCTGTAATGGCTAAAAAAGGTTATTGTGATTTCCCTGCCATCTTTAACTTTGGTGCCTCAAACGCTGACACTGGTGGCTTGGCTGCTTCCTTTTTTGTTGCTGCACCAAAAACACCCAATGGAGAGACCTTTTTTCATAGGCCTGTTGGAAGGTTCTCCGATGGCCGACTCATTATTGATTTCATCGCTCAGAGTTTTGGACTCCCTTATCTGAGTCCATATCTTGATTCACTGGGGACCAACTTCTCACGTGGCGCAAACTTTGCAACAGCAGGATCCACAATCATACCCCAACAAGGTCAAGCTCAGCTTAGGTTCAGTCCTTTCTCCCTTGGAGTTCAGTACTCGCAATTCCAACGTTTTAAACCCACAACACAGTTCATTAGAGACCAAGGTGGGGTATTTGCAACACTGATGCCAAAAGAAGAGTACTTTAATGAAGCTTTATACACATTTGATATCGGTCAAAATGATCTCACAGCTGGCTTTTTCGGTAACATGACCCTACAGCAAGTCAATGATTCTATACCTGATATAATCAAAAGTTTCACATCAAATATAAAGAACTTGTACAATTTGGGGGCCAGATCATTTTGGATACACAACACAGGACCCATTGGTTGTCTCCCTTTAATTTTGGCCAATTTTCTATCTGCTGAAAGGGATGCTTATGGTTGTGCAAAGGCATATAATGAGGTGGCTCAGAATTTTAACCAGAATTTGAAGGAAGCCTTAGCTCAACTTCGTAAGGAACTTCCTTTGGCAGCAATCACATATGTAGATATCTACTCTCCTAAATACTTACTTTTCAAAAACCCAAAGAAATATGGATTTGAGCTTCCACATGTTGCTTGTTGTGGCTATGGAGGGAAGTACAACTTCAGCAATAGTGTTGGATGTGGAGGAACCATTAAGGTCAATGGCAATGATGTTTTTGTGGGTTCATGTGAAAGACCATCTGTTAGAGTGGTATGGGATGGGACCCACTACACTGAAGCAGCTAACAAGGTTGTCTTTGATTTAATCTCTACTGGGGCTTTCACAGACCCACCCATTCCCTTGAAAAAGGCATGTCATAGAAATTTTACATAA 1182 0.4137 MEFPSITKFHIPLVSSSLVLLCIATTILLNPVMAKKGYCDFPAIFNFGASNADTGGLAASFFVAAPKTPNGETFFHRPVGRFSDGRLIIDFIAQSFGLPYLSPYLDSLGTNFSRGANFATAGSTIIPQQGQAQLRFSPFSLGVQYSQFQRFKPTTQFIRDQGGVFATLMPKEEYFNEALYTFDIGQNDLTAGFFGNMTLQQVNDSIPDIIKSFTSNIKNLYNLGARSFWIHNTGPIGCLPLILANFLSAERDAYGCAKAYNEVAQNFNQNLKEALAQLRKELPLAAITYVDIYSPKYLLFKNPKKYGFELPHVACCGYGGKYNFSNSVGCGGTIKVNGNDVFVGSCERPSVRVVWDGTHYTEAANKVVFDLISTGAFTDPPIPLKKACHRNFT 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01216 393 CDD SGNH_plant_lipase_like 42 375 IPR035669 -
Pumo9g01216 393 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 20 381 - -
Pumo9g01216 393 Coils Coil 257 281 - -
Pumo9g01216 393 Gene3D SGNH hydrolase 33 375 IPR036514 -
Pumo9g01216 393 Pfam GDSL-like Lipase/Acylhydrolase 44 372 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01216 Pumo-Chr9 36421942 36424327 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01216 42 379 Acyl Lipid Metabolism Gene Families AT4G10950 28.367 1.84e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01216 - - gmx:100818460 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01216 9 36421942 36424327 Pumo9g01216 9 36421942 36424327 ECH