LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo9g01202	ATGCCCTGCAATTTTGAAGCTAGTGTTAGATTGTTAGACCCAATGATGGATAAGAAGAGATGGCTATGGAAGAGGAAGTCTTCTGATAAGAGCCCTGGGGAAACTGAAAGTTCAGGATCTGTTTCTTCTCATTCTGAGAGGTACTCAGATGAACAGGAGGCATTGAAGGAATCTCCTAGTAGAAGCAATCAGTCACCTGATGTCACATCAAAAGCTACGGCCTATGCTGAAGATGTTAACCATAGTTCATTTATCAATGAACAATTGCCTGAAGAAGTCACCTCTAAATCTGTACCTGCTACAGGAATTGCAAGTGATGGTTCCTCGGAGAAAGACGAAAATGGAGAAAATGAAAATATAAAAGATGTAAAGGAAGGTGATCTAAATGATGGGTTGAGGAATATGTCAGAGAAGCTATCTGCTGCACTGGTGAATGTCAATGCCAAAGAAGACTTGGTTAAGCAGCATGCCAAAGTTGCTGAAGAAGCCATTGCAGGATGGGAAAAGGCTGAAAATGAAGTGGCAGTTTTAAAGAAGCAACTTGACACTGTCATTCTCAGGAATTCAGTTCTGGAAGACCGAGTCACTCATCTAGATGGAGCACTTAAGGAGTGTGTTAGGCAGCTAAGACAGACAAGAGAAGAGCAGGAAGAAAATATCTATGATGCTATTGCAAGAAAGACACAAGAATTGGAATCAGCCAAAATTAAACTTGAGAACAAAATCACTGAGCTCCAGAACAAATTAGATGCTTCAGAAGCTAAGTCTTCTTCTATTGACTTCCGTATGTGTCAAAAGGTTGAATGTTTGGAGAAAGAGAACATGGCTCTCAGGCACGAGATCCTAGTTCAATCAGAAGAGCTAGAAATCAGGACAATTGAGAGGGATCTAAGCACTCAAGCTGCTGAGACAGCTAGCAAGCAGCATTTAGAAAGCATCAAGAAAGTAGCCAAGCTTGAGGCCGAATGTCGGAGACTGAGGAGCATGGCTTCTAGAGCTTCTGTAGCTAATGATCATAAATCCATTGCTCAGTCCTCATTTACTGTTGAATCTCTAACAGATAGTCAATCAGACAGCGCGGAGAGGCTTACTGCAGTGGAGATTGATGCCCAAAAGATGACTGGCTCAGAACCAAACAAGTGTGAGCCAAGTTGTTCCGACTCATGGGCATCTGCACTAATTGCTGAGCTTGATCAGTTCAAGAATGAAAAATGCAGACAAACACCATCCAGTTCTGTTAAAATTGATCTCATGGATGATTTTCTTGAAATGGAACGACTTGTTGCATTGCCTGAAACTAAGAAGGAAAGCATGGTCCAAGAGTCAGTTGTTACCAATCAATGCATAAACAAAGAAAGCTCTCTCAGAGTAGAGTTTGAGATCATGAATCAGCAAATGGATGAGCTAAAAGAAAAGTTAGAGAAGGTGGAATCTGATAAAGCTGAACTAGAGATAGCTTTGATGAAAAGTGAAGAGTGTATTGAGGAGTCACAACTTCAGTTGAGGGAGGCACAAGAGCAATTGCAGGAGTTGCAAAGAGAGCTAGAAAATGCCTACAAATCAAAGCAAAGGGTAGAAAATCACCTACTGGACATGGTGGCTGAGGCTGAAACATTATCTGTGAAGGTTGAATTCTTAGAAGCTGAGGTTGATAAGGAGAGGACCGTGTCAAGTGAAATTGCAATGAAGTATAGGGACCTGGAGGAAGAGTTAGAAAGAAAATCTGCAAAGGTTGTCATACTAGAAGCAGAGCTTGATAAGAAGAAGGATTTGTCAAGTGAAATTGCAATGAAGTTTAGGGACCTGGAGGAAGAGTTAGAAAGAAAATCTGCAAAGGTTGACATACTAGAAGCTGAGCTTGATAAGAAGAAGGATGTGTCAAGTGAAATTGCAATGAAGTTTAGAGACCTGGAGGAAGAGTTAGAAAGAAAATCTGCAAAGGTTGACATACTAGAAGCTGAGCTTGATAAGAAGAAGGATGTGTCAAGTGAAATTGCAATGAAGTTTAGAGACCTGGAGGAAGAGTTAGAAAGAAAATCTGCAAAGGTTGACTTGTTAGAAGCAGAGGTTGCTAAGGAGAGGGATGTGTCAGATAAAATTGCAAAAATGTGTAAGGACTTGGAGGAAGAGCTACAAAGCAAATCTGCAAAGGTTGGTTTATTAGAAGCAGAGGTTGCTAAGGAGAGGGATGTGTCAGATAAAATTGCAAAAAGGTGTAAGAACCTGGAGGAAGTGCTAGAGAGCAAATCTGCAAAGCTTGAGTTATTAGAAGCAGAAGTTGATAACGAGAGGGCTGTGTCAGATGAAATTTCAATGAAGTGTAAGGACCTAGAGGAGAAGCTAGAAAGAAAATCTGCAAAGGTTGACTTGTTAGAAGAAGTGATTCATAAGGAGAGGGCTACTTCAGAAGAAATTGCAATGAAGTGTAGGGAATTGGAGGAAGAATTGCTCAGGTCAACAGCTAGTTCATATGGAGAAAAGAAGATTAAGCAGGAGGACCTAGCACTGGCTGCCGGAAAGCTTGCCGAGTGCCAGAAAACAATAGCATCTTTGGGGAATCAGCTGAAGTCCCTGGCTACACTAGAAGATTTCCTCATTGACACTGCAAGCATTCCAGCAAGTCCATCACTCATTGGTCAGGCTGGTGGGGAGTTGTGGAAGTTGCATTCAAATGGCACATTTTCGCCTAAAAGAGATTCCATTTCTTCAAGGTTGGCTGATGGTAGTAGCTCTTATCCATCCTTAAACAAAAATGAGGAAACCTCACCGCTCTCATCGTCTTCATCGCCGGCCTTGCCAAATCATGTCAGTTCTGAGAAGAGTAGAAATGGCTTTGCAAAGTTTTTCTCTAGAACCAAGAGTGGGATCCGGCTAGAAATTTAG	2883	0.4159	MPCNFEASVRLLDPMMDKKRWLWKRKSSDKSPGETESSGSVSSHSERYSDEQEALKESPSRSNQSPDVTSKATAYAEDVNHSSFINEQLPEEVTSKSVPATGIASDGSSEKDENGENENIKDVKEGDLNDGLRNMSEKLSAALVNVNAKEDLVKQHAKVAEEAIAGWEKAENEVAVLKKQLDTVILRNSVLEDRVTHLDGALKECVRQLRQTREEQEENIYDAIARKTQELESAKIKLENKITELQNKLDASEAKSSSIDFRMCQKVECLEKENMALRHEILVQSEELEIRTIERDLSTQAAETASKQHLESIKKVAKLEAECRRLRSMASRASVANDHKSIAQSSFTVESLTDSQSDSAERLTAVEIDAQKMTGSEPNKCEPSCSDSWASALIAELDQFKNEKCRQTPSSSVKIDLMDDFLEMERLVALPETKKESMVQESVVTNQCINKESSLRVEFEIMNQQMDELKEKLEKVESDKAELEIALMKSEECIEESQLQLREAQEQLQELQRELENAYKSKQRVENHLLDMVAEAETLSVKVEFLEAEVDKERTVSSEIAMKYRDLEEELERKSAKVVILEAELDKKKDLSSEIAMKFRDLEEELERKSAKVDILEAELDKKKDVSSEIAMKFRDLEEELERKSAKVDILEAELDKKKDVSSEIAMKFRDLEEELERKSAKVDLLEAEVAKERDVSDKIAKMCKDLEEELQSKSAKVGLLEAEVAKERDVSDKIAKRCKNLEEVLESKSAKLELLEAEVDNERAVSDEISMKCKDLEEKLERKSAKVDLLEEVIHKERATSEEIAMKCRELEEELLRSTASSYGEKKIKQEDLALAAGKLAECQKTIASLGNQLKSLATLEDFLIDTASIPASPSLIGQAGGELWKLHSNGTFSPKRDSISSRLADGSSSYPSLNKNEETSPLSSSSSPALPNHVSSEKSRNGFAKFFSRTKSGIRLEI	960

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo9g01202	960	Coils	Coil	599	626	-	-
	Pumo9g01202	960	Coils	Coil	704	724	-	-
	Pumo9g01202	960	PANTHER	FILAMENT-LIKE PLANT PROTEIN 4	16	575	-	-
	Pumo9g01202	960	SUPERFAMILY	Tropomyosin	459	659	-	-
	Pumo9g01202	960	Coils	Coil	267	287	-	-
	Pumo9g01202	960	Coils	Coil	206	255	-	-
	Pumo9g01202	960	Coils	Coil	739	815	-	-
	Pumo9g01202	960	MobiDBLite	consensus disorder prediction	23	131	-	-
	Pumo9g01202	960	Coils	Coil	452	528	-	-
	Pumo9g01202	960	MobiDBLite	consensus disorder prediction	58	108	-	-
	Pumo9g01202	960	Coils	Coil	557	591	-	-
	Pumo9g01202	960	Coils	Coil	669	696	-	-
	Pumo9g01202	960	MobiDBLite	consensus disorder prediction	896	940	-	-
	Pumo9g01202	960	Pfam	Filament-like plant protein, long coiled-coil	149	257	IPR008587	-
	Pumo9g01202	960	Pfam	Filament-like plant protein, long coiled-coil	382	446	IPR008587	-
	Pumo9g01202	960	Pfam	Filament-like plant protein, long coiled-coil	264	331	IPR008587	-
	Pumo9g01202	960	Pfam	Filament-like plant protein, long coiled-coil	737	860	IPR008587	-
	Pumo9g01202	960	Coils	Coil	634	661	-	-
	Pumo9g01202	960	MobiDBLite	consensus disorder prediction	109	131	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo9g01202	Pumo-Chr9	36145531	36151140	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo9g01202	-		-	gmx:100782855	1502.26

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo9g01202	9	36145531	36151140	Pumo9g01202	9	36145531	36151140	ECH