Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01187 ATGTCTTCCGCCGCCGCCCGCTCCTCCCAAAGAGCCTCCGTCTCGCCGCTCCGCTCACGGAAGTCGCCGGCGGGAGCCGCCAAACCGGCCGGAAGACCCACCACTCCGTCCTCCTCCTCCATCGCCTCGAGGCCGTCGTCCTCCACCGCGTCGAGGCCGTCGTCCTCCACCGCGTCGAGGCCGTCGTCGAAGGCCTCCGTCTCGCCGGTGGCCGCCACCGCCGCTGTGCCTGACGTCAGCAAGGCGAAGGAGAATGTCACTGTCACCGTCCGGTTCCGACCCCTCAGGGGACGAAGTGGCGTGGTATGCGGATGGGGATCAATAGTCAGAAATGAGTACAATCCTTCCATTGCTTATGGCTTTGACAAGGTATTTGGGCCTGCAACAACAACTCGGCATGTTTATGATGTGGCTGCTCAGCATGTTGTCAGTGGTTCTATGGAAGGGATTAACGGTACTGTTTTTGCATATGGTGTTACTAGTAGTGGAAAGACTCATACCATGCATGGGGAGCAAAAATCACCTGGAATTATCCCACTTGCAGTGAAGGATGTCTTTGGTATTATACAAGAGACTCCTGGACGAGAATTCTTATTACGTGTCTCATATCTTGAGATATACAATGAGGTCATTAATGACTTGCTGGATCCAATTGGGCAGAATCTAAGAATACGAGAGGATGCTCAGGGTACTTATGTTGAAGGAATCAAAGAGGAAGTTGTGCTATCCCCTGCTCATGCCCTTTCTTTGATTGCTACTGGCGAAGAGCATAGACATGTGGGTTCAAATAATTTCAATCTAGTCAGCAGTCGAAGCCACACTATTTTCACCTTGACTATTGAAAGCAGTTCGCGAGGTGAAAATATAGGGGAAGAGGATGTGACATTGTCCCACTTGCACTTAATTGATCTTGCAGGGTCTGAAAGTTCTAAAACTGAAACAACTGGTTTGCGGAGGAAAGAAGGTTCCTATATTAATAAAAGCTTGCTTACTCTTGGAACGGTGATTGCTAAATTAACAGATGGAAAGGCAACTCATATTCCTTATCGAGATTCAAAGCTCACTCGGTTGTTACAATCATCCCTTAGTGGACATGGACGGATTTCTCTCATTTGCACAGTTACTCCTGCTTCTAGCAGTAGTGAAGAGACACACAACACATTAAAATTTGCACACCGGAGTAAGCATGTTGAAATCAAAGCTTCTCAAAATAAGATTATGGATGAGAAGTCTCTGATCAAGAAGTATCAGAGGGAAATTTCTGAGTTAAAGCAGGAGCTGCAGCAGTTGAAGCGTGGCATTGTTGAGAATCCCAATATGGCCACATCTTCACAAGAAGATCTGGTTACTCTGAAGCTTCAGCTGGAAGCTGGCCAGTCCAAATTGAAGTCGAGATTAGAAGAGGAGGAACAAGCTAAAGCAGCATTGATGGGAAGAATTCAGCGACTAACCAAATTAATCTTAGTTTCTACAAAGAATACAATGTCGTCAAGCATTCCAGAAAGGCCCAGCCATAGGAGAAGGCATTCTTTTGGGGAAGATGAGCTAGCATATTTACCGGATAAAAAACGTGAGACCTGGATTAATGATGACGCAGGGAGCCATGCTTCAGTTCCTTCACCAGAAGAAAAGGATGACAGTACCAATTTAGATGAATTGGGGAAGGATTATAAAAGAAGCAAAAGGCGTGGAATGCTTGGTTGGTTGAAGCTGAGGAAACCTGATAATGTTGATGGATTATCGCCAAATGTTGATAGTGAGGGCTCTGCAAATGGGTCACCTGCTTCTGCTTCAAAATTAACTCCAAACAGAGTTATGCTTTATGACATGAAAGATTCAAGCAGGAATTCCGTCAGCAAAAAGGATAATGCCTCAGCTCTCAATTCTTTTCCAGGAAGAACTCAAGCAGGTGACTTGTTCAGTGTAACTGTTGGAGGTCGTCAACTTCCTCCGACTGGAACTACTGTTACAGATCAAATGGATCTTCTGCGTGAACAAGTAAAAATGTTGGCTGGAGAGGTGGCATTTTGTATTAGTTCTCTGAAAAGACTGTCTGAACAAGCTGCTAACAAGCCTGAAGATATCCAACTACAAGAGGACATGCATAAGCTGAAGGGTGAAATTAGCCAAAAGAAGAATCAAATCCGTATCCTAGAGCAACGGATGATTGGATCAATAGGACATGCACCAAGTAACAGTGAAATGTCTCAGGCTCTATCCAAGCTTACCACTGAGCTCAATGAAAAAATTTTTGAACTTGAGATCAAGTCTGCAGATAACAGGATACTTCAAGATCAACTGCAGTTGAAGAATTCAGAGAATGTTGATATGCAAGAGACAATTATTTCACTAAAGAAACAGATAAATTTGTTGCTGGATAAAACCTCAACCAATCATCAGCACATTGCTGATAATGAGACTGACTGTTCTAGAGATGTATTGGGACAGACTGATGAAGCACAATCAGTCAAAAACTTGAATGCAATAGTTTCTCAAGCACACCCCAAGCAAGGAAGTAATGATTCAATTATAAATTCTCAAATTCTTGTGCAGGCAGCTGAAATAGAGAATTTAAGGCAAGAGAATGTGAGATTAGTGGAAGAGAAAGATGGGCTTGAAATTCATAGCCAGAAACTTGCAGAGGAAGCTTCATATGCAAAAGAGTTGGCAGCAGCTGCAGCAGTTGAACTTCGAAACCTCGCTGAAGAAGTGACAAAACTTACTTATGAAAATGCAGAACTGAGTGGTGATCTGGCAGCTGCAAAAGAAGCCTCTTGCAAATCAAACTTTTCTCCAACATCATATGATTGCAAGCAAAATATTAATAATAGTTTTCAACGAGATGGGAAATCGAAAAAGCCGGGTAATGAAGTTCTTATCGAGGAGTTGCAGAAGGACCTTAATGCTAGACTCCAAAGAGAAGCTGCATTAGAAGCAGCTCTATCTGTGAAAGTTGAAATAGAAGCTGACCTAAGAAGTACACTTGATGAAATAAAACACCAAAAACAAGATTTGGAATATGAGCTTACAAACATGCGGATGCTGGTGTCAAAGATGAAAAAGTCTGGCATTAATGTTGAGGACAAGTCAACTGTTTATGTGCATAATGATATACAAACCAAGGTTAAAAATGGACATCCAACATCGAATGGTTACTGTCATAGAAAACAATACAAAGAGGGTGAAATTTTAGGAAGCATGGAAGATATGATTGCGTTAGAAGAACTGAGGGCTAATTATCAAAGAGAAAGAAGAAGATGCAAAGAACTAGAAAGTCATATTTCTATATTGAAGGGTGAAGATATCGCTGGTCTGGATGTTATGGCCCTTGAAGAACTTCAAAACCTTCATATTGAGGCAATAACAAAGATTTGCCATGCAAAGGTACAGTAA 3393 0.4279 MSSAAARSSQRASVSPLRSRKSPAGAAKPAGRPTTPSSSSIASRPSSSTASRPSSSTASRPSSKASVSPVAATAAVPDVSKAKENVTVTVRFRPLRGRSGVVCGWGSIVRNEYNPSIAYGFDKVFGPATTTRHVYDVAAQHVVSGSMEGINGTVFAYGVTSSGKTHTMHGEQKSPGIIPLAVKDVFGIIQETPGREFLLRVSYLEIYNEVINDLLDPIGQNLRIREDAQGTYVEGIKEEVVLSPAHALSLIATGEEHRHVGSNNFNLVSSRSHTIFTLTIESSSRGENIGEEDVTLSHLHLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIAKLTDGKATHIPYRDSKLTRLLQSSLSGHGRISLICTVTPASSSSEETHNTLKFAHRSKHVEIKASQNKIMDEKSLIKKYQREISELKQELQQLKRGIVENPNMATSSQEDLVTLKLQLEAGQSKLKSRLEEEEQAKAALMGRIQRLTKLILVSTKNTMSSSIPERPSHRRRHSFGEDELAYLPDKKRETWINDDAGSHASVPSPEEKDDSTNLDELGKDYKRSKRRGMLGWLKLRKPDNVDGLSPNVDSEGSANGSPASASKLTPNRVMLYDMKDSSRNSVSKKDNASALNSFPGRTQAGDLFSVTVGGRQLPPTGTTVTDQMDLLREQVKMLAGEVAFCISSLKRLSEQAANKPEDIQLQEDMHKLKGEISQKKNQIRILEQRMIGSIGHAPSNSEMSQALSKLTTELNEKIFELEIKSADNRILQDQLQLKNSENVDMQETIISLKKQINLLLDKTSTNHQHIADNETDCSRDVLGQTDEAQSVKNLNAIVSQAHPKQGSNDSIINSQILVQAAEIENLRQENVRLVEEKDGLEIHSQKLAEEASYAKELAAAAAVELRNLAEEVTKLTYENAELSGDLAAAKEASCKSNFSPTSYDCKQNINNSFQRDGKSKKPGNEVLIEELQKDLNARLQREAALEAALSVKVEIEADLRSTLDEIKHQKQDLEYELTNMRMLVSKMKKSGINVEDKSTVYVHNDIQTKVKNGHPTSNGYCHRKQYKEGEILGSMEDMIALEELRANYQRERRRCKELESHISILKGEDIAGLDVMALEELQNLHIEAITKICHAKVQ 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01187 1130 MobiDBLite consensus disorder prediction 1 74 - -
Pumo9g01187 1130 FunFam Kinesin-like protein KIN-7G 77 428 - -
Pumo9g01187 1130 MobiDBLite consensus disorder prediction 573 632 - -
Pumo9g01187 1130 Coils Coil 1070 1100 - -
Pumo9g01187 1130 Coils Coil 848 875 - -
Pumo9g01187 1130 Pfam Kinesin motor domain 110 397 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo9g01187 1130 Gene3D Kinesin motor domain 76 429 IPR036961 -
Pumo9g01187 1130 MobiDBLite consensus disorder prediction 582 600 - -
Pumo9g01187 1130 MobiDBLite consensus disorder prediction 501 516 - -
Pumo9g01187 1130 SMART kinesin_4 83 405 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo9g01187 1130 PANTHER CENTROMERE PROTEIN E 82 1022 IPR027640 GO:0003777|GO:0007018
Pumo9g01187 1130 ProSiteProfiles Kinesin motor domain profile. 85 397 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo9g01187 1130 PRINTS Kinesin heavy chain signature 298 316 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo9g01187 1130 PRINTS Kinesin heavy chain signature 149 170 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo9g01187 1130 PRINTS Kinesin heavy chain signature 263 280 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo9g01187 1130 PRINTS Kinesin heavy chain signature 347 368 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo9g01187 1130 ProSitePatterns Kinesin motor domain signature. 297 308 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pumo9g01187 1130 MobiDBLite consensus disorder prediction 531 556 - -
Pumo9g01187 1130 MobiDBLite consensus disorder prediction 537 556 - -
Pumo9g01187 1130 Coils Coil 897 917 - -
Pumo9g01187 1130 MobiDBLite consensus disorder prediction 1 17 - -
Pumo9g01187 1130 MobiDBLite consensus disorder prediction 32 69 - -
Pumo9g01187 1130 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 432 IPR027417 -
Pumo9g01187 1130 Coils Coil 701 721 - -
Pumo9g01187 1130 MobiDBLite consensus disorder prediction 493 516 - -
Pumo9g01187 1130 Coils Coil 960 980 - -
Pumo9g01187 1130 CDD KISc_CENP_E 85 397 - -
Pumo9g01187 1130 Coils Coil 459 486 - -
Pumo9g01187 1130 Coils Coil 399 433 - -
Pumo9g01187 1130 Coils Coil 988 1015 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01187 Pumo-Chr9 35535327 35552400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01187 77 726 Miscellaneous Gene Families AT5G06670 57.768 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01187 K11498 - gmx:100817131 1912.5