Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01078 ATGATTACAGGGGACGATTTGTACAAGGTGATGTGCGCCATGGTTCCTCTTTACTTCGCAATGCTAGTGGCCTACGGTTCAGTCAAGTGGTGCAAGATGTTCAGCCCCGACCAGTGCTCCGGCATCAACCGCTTCGTGGCGGTGTTCGCGGTTCCGGTGCTCTCCTTCCACTTCATCTCCATGAACAACCCTTATCAGATGGACGCCAGGTTCATCGTCGCCGACACGGCGTCGAAGCTCCTGGTGCTCCTCTTGCTCTCTCTTTGGGCCATTTTTTTCGCCGGAGGCTCCCTGGACTGGCTCATCACGCTCTTCTCGCTGGCCACGCTGCCCAACACGCTCGTCATGGGTATTCCGCTGCTCCAGGCCATGTACGGTGATTTCACACAATCACTCATGGTGCAACTCGTTGTCCTCCAGTGCATCATATGGTATACTCTACTTCTCTTCTTGTTCGAGTACAGAGCCGCGACGCTTCTGATCAAGCGGCAGTTCCCGGGGCCAACGGCGGCGTCCATCACGAAATTCGAGGTCGACGGCGACGTCATCTCCCTCGACGGCCACGACATGCCGCTGCGGACGGAGTCCGAGACCGACGACCACGGCCGGATCCGCGTGCGAATCCGGCGCTCCGTCTCGTCGGCGCCGGAGACGAACTCCTCCGTCGTCACGCCGCGGCCGTCGAACCTCTCCAACGCCGACATATTCTCCATCAACACGCCGCTGCACCTGCACGACGGCGACCTCCCTGCCGCCGGCGCCAGCCCCCACCTCTCCGGCTACGCCTCCTCCGACGCGTACTCGCTGCAGCCGACGCCGCGGGCGTCGAACTTCAACGAGATGGAGGCCGGCACGCCGGTGTGGGGGAGGTCGCCGGTCGCCGCCGGGAGGGTGTGCCGGCAGTCGTCGCCGGTGGCGAGGGTGGTGTGGGAGTCGCCGGGGAAATGCCTCGGAGACGAGAGACAAAGCTGCAAGGACATTACCATGTCAGATAAAGAAATCAGCTTCAGAGACAGCACCCAAGTCCCAATGCCGGGGGAAGCTGCAGACCCCAAAGACACAGTTGCCAATAACCAGAAAATGCCACATGCCTTTGTCATGATGAGGCTTATACTCGTCGTAGTAGGAAGAAAACTTTCTCGAAATCCTAATACATATTCTAGTGTATTAGGACTTCTTTGGTCTCTAATCTCTTTCAAATGGAATATGGAAATGCCTAGTCTTATCAAAGCATCCGTCAAAATCATCTCTGATGCGGGCCTTGGGATGGCTATGTTTAGTTTAGGGCTTTTCATGGCCCTTCAGCCTCGTATCATAGCCTGCGGTACCAAAAGAGCAGTCATGGGCATGGTCATTCGCTTCATGTGTGGGCCTCTTGTAATGTCTGCCTCTTCTATTGCCATTGGATTAAGACAAGACAGACTACACACTGCAATTGTACAGGCTGCTCTTCCACAGGGGATAGTGCCATTTGTATTTGCAAGGGAATATGGACTGCATCCTGATATTTTGAGCACGGGGGTTATCTTTGGCATGTTGGTTTCCTTACCAATAACTCTCTTGTATTACATATTTCTTGGCTTATGA 1587 0.5532 MITGDDLYKVMCAMVPLYFAMLVAYGSVKWCKMFSPDQCSGINRFVAVFAVPVLSFHFISMNNPYQMDARFIVADTASKLLVLLLLSLWAIFFAGGSLDWLITLFSLATLPNTLVMGIPLLQAMYGDFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATLLIKRQFPGPTAASITKFEVDGDVISLDGHDMPLRTESETDDHGRIRVRIRRSVSSAPETNSSVVTPRPSNLSNADIFSINTPLHLHDGDLPAAGASPHLSGYASSDAYSLQPTPRASNFNEMEAGTPVWGRSPVAAGRVCRQSSPVARVVWESPGKCLGDERQSCKDITMSDKEISFRDSTQVPMPGEAADPKDTVANNQKMPHAFVMMRLILVVVGRKLSRNPNTYSSVLGLLWSLISFKWNMEMPSLIKASVKIISDAGLGMAMFSLGLFMALQPRIIACGTKRAVMGMVIRFMCGPLVMSASSIAIGLRQDRLHTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPITLLYYIFLGL 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01078 528 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 527 - -
Pumo9g01078 528 Pfam Membrane transport protein 10 523 IPR004776 GO:0016020|GO:0055085
Pumo9g01078 528 NCBIfam auxin efflux carrier 1 528 IPR014024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01078 Pumo-Chr9 29555499 29564323 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01078 1 506 Organic Solute Cotransporters AT1G77110 65.950 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01078 K13947 - gmx:100800139 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01078 9 29555499 29564323 Pumo9g01078 9 29555499 29564323 ECH