Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01075 ATGCAGATACAAACTCTCCCACTTGCACCACCACCGACTCCAATTAGAAGCACCCGCCACCGCATGCCGCCACCGAAATGCACCACCACCGCCACACCACCGCCGTTGAAAGCGATGAAGAACCACTCGATGCCACCGGAAAAGATAGAGATTTTCAAGTCCCTGGAGGGCTGGGCCTCGCAGCGGGTCCTGCCGCTGCTGAAGCCCGTGGAGCAAAGCTGGCAGCCACAGAGCTTACTCCCCGACTCGTCGACGTTGCCGTTCGACGAGTTCACCGAAGCGGTGAAGGCGCTTCGCGACCGCACCAAGGAGCTACCCGATGAGTACTTCTTGGTGCTGGTCGGTGACATGATAACGGAGGAAGCGCTTCCCACTTACCAGACCATTATGACCGGCCTGGATGGGGTGAAGGATGAGTGCGGAGCAAGCCCGAGCCCGTGGGCCGTGTGGACCCGGGCCTGGTCCGCGGAGGAAAATAGGCACGGGGACTTGCTCAGAACTTATCTGTATCTTTCTGGCCGTGTTGACATGAAGATGATCGAGAAGACTATTCATTACCTCATTGCAGCTGGCATGGACCCTGGTTTCGAGAGCAACCCGTATTTGGGGTTTGTGTATACGTCATTCCAAGAGCGAGCAACATTCGTGTCACACGGCAACACAGCTCGGCTTGCGAAGAAGGGTGGCGATCCAGTGTTGGCGCGCATATGCGGGACCATCGCTGCGGACGAGAAGCGGCACGAGAATGCGTATTCGAGAATCGTCGAGAAGCTTCTAGAAGTGGACCCCACCGGGGCAATGGTGGCCATAGGAACCATGATGGAGAAAAAGATCACGATGCCGGCGCACCTGATGTACGATGGGGAGGACCCCAGGCTATTCGAGCACTACTCCGCGGTGGCGCAGCGTGTTGGCGTGTACACAGCCAACGACTATGCGGACATCTTGGAGTTTCTGATCGGACGGTGGAGATTGGAGAAGCTGGAAGGTTTGACGGCTGAAGGAAAGAGGGCGCAGGAGTTTGTGTGTGGGTTAGCACCGAGGATTAGGAGGGTGCAAGAGCGAGCTGATGAGCGAGCGCGTAAGATGAAGCCATGTGGAGTTAAGTTCAGCTGGATCTTCAATAAAGAGCTGCATTTGTGA 1143 0.5661 MQIQTLPLAPPPTPIRSTRHRMPPPKCTTTATPPPLKAMKNHSMPPEKIEIFKSLEGWASQRVLPLLKPVEQSWQPQSLLPDSSTLPFDEFTEAVKALRDRTKELPDEYFLVLVGDMITEEALPTYQTIMTGLDGVKDECGASPSPWAVWTRAWSAEENRHGDLLRTYLYLSGRVDMKMIEKTIHYLIAAGMDPGFESNPYLGFVYTSFQERATFVSHGNTARLAKKGGDPVLARICGTIAADEKRHENAYSRIVEKLLEVDPTGAMVAIGTMMEKKITMPAHLMYDGEDPRLFEHYSAVAQRVGVYTANDYADILEFLIGRWRLEKLEGLTAEGKRAQEFVCGLAPRIRRVQERADERARKMKPCGVKFSWIFNKELHL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01075 380 MobiDBLite consensus disorder prediction 1 42 - -
Pumo9g01075 380 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 37 378 IPR005067 GO:0006631|GO:0045300
Pumo9g01075 380 Gene3D Ribonucleotide Reductase, subunit A 34 380 IPR012348 GO:0016491
Pumo9g01075 380 SUPERFAMILY Ferritin-like 40 378 IPR009078 -
Pumo9g01075 380 CDD Acyl_ACP_Desat 47 356 IPR005067 GO:0006631|GO:0045300
Pumo9g01075 380 FunFam Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic 32 380 - -
Pumo9g01075 380 Pfam Fatty acid desaturase 47 374 IPR005067 GO:0006631|GO:0045300
Pumo9g01075 380 PIRSF Dlt9_acylACP_des 11 380 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01075 Pumo-Chr9 29416012 29418545 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01075 8 380 Acyl Lipid Metabolism Gene Families AT1G43800 72.679 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01075 K03921 - gmx:100816146 674.085