Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00821 ATGTCTTCTCTCCATTTCCTTCCGCAAACCCCCTCTAAACCGCTTCACCATCCTCTTTCCTTTCCGCGACATGGCCATCGCCACTGTTCCATCACTGTCCCCACCGCTCTCAGTAGCTCCAACCAATCTGGAGCCTCGCTTGATTCTAATACTCAAGTGTCTCGTATTCCGCTTTTGACTTCCTCCGAGGCCTATGAAAGGCTAAAAACATTTAGAGAAAATATAAAGGGCAAGCAACAATTCCTTGCCATGTATTCTAGTATTTTTGGTGGGATAACAACAGACCCAGCTGCTATGGTTATTCCTATGGATGACCACATGGTCCACAGAGGCCACGGTGTCTTTGATACTGCAGCAATAATGGACGGATACCTATATGAGCTAGATCAACACCTTGATCGCTTTTTACGTTCAGCATCCATGTCTAAAATAGATCCCCCATTTGATCGTGAAAGCATAAGAAGAATACTCATACAAACTGTAAGTGCTTCCAAGTGTAGAAAAGGATCACTAAGATATTGGCTCTCAGCAGGACCTGGTGATTTTCAGCTATCTCCCTCTGGCTGCCACCAATCAAGTCTTTATGCAATCATAATACAGGATTTGTCAACATCGTCGCCTAATTTCAGGGGGGTTAAAGTTGTTACTTCATCTATTCCCATTAAACACCCCAAGTTTGCTGTCACTAAGAGTGTGAATTATCTTCCAAATGTGCTCTCAAAGGTGGAAGCTGAAGAGGCCGGTGCTTTTGTAGGCATTTGGCTTGATGGTGAAGGTTTTGTTGCTGAAGGGCCTAATATGAATGTGGCCTTTGTCACTAAAGAGAATGAACTTGTAATGCCCCACTTTGACAAAATTCTAAGTGGCTGCACAGCTAAGAGAGTTTTAACCCTTGCTGAGAGTTTGTTAAGGGAAGGTAAGCTTAAGGGGATAAGGATGAAAAATGTGACTGTTGAGGAAGGTAAGAAAGCAGATGAAATGATGCTTGTTGGCAGTGGAGTTCTTGTTTGCCCTGTAGTGCAGTGGGATGAACAGGTTATTGGTGATGGCAAAGAAGGCCCTATAACACAGGCTCTCTTAAATCTAATTGTTGAGGACATGAAATCAGGACCCTCCACTGTTCGTATACCTGTTCCTTATTGA 1143 0.4357 MSSLHFLPQTPSKPLHHPLSFPRHGHRHCSITVPTALSSSNQSGASLDSNTQVSRIPLLTSSEAYERLKTFRENIKGKQQFLAMYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAIMDGYLYELDQHLDRFLRSASMSKIDPPFDRESIRRILIQTVSASKCRKGSLRYWLSAGPGDFQLSPSGCHQSSLYAIIIQDLSTSSPNFRGVKVVTSSIPIKHPKFAVTKSVNYLPNVLSKVEAEEAGAFVGIWLDGEGFVAEGPNMNVAFVTKENELVMPHFDKILSGCTAKRVLTLAESLLREGKLKGIRMKNVTVEEGKKADEMMLVGSGVLVCPVVQWDEQVIGDGKEGPITQALLNLIVEDMKSGPSTVRIPVPY 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00821 380 MobiDBLite consensus disorder prediction 1 21 - -
Pumo9g00821 380 Gene3D - 204 373 IPR043132 -
Pumo9g00821 380 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 89 368 IPR036038 GO:0003824
Pumo9g00821 380 FunFam D-alanine aminotransferase 203 370 - -
Pumo9g00821 380 PANTHER AMINO-ACID AMINOTRANSFERASE 52 372 - -
Pumo9g00821 380 Pfam Amino-transferase class IV 113 341 IPR001544 GO:0003824
Pumo9g00821 380 CDD PLPDE_IV 105 363 - -
Pumo9g00821 380 Gene3D - 60 200 IPR043131 -
Pumo9g00821 380 FunFam D-amino-acid transaminase, chloroplastic 60 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00821 Pumo-Chr9 16624440 16627893 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00821 K18482 - gmx:100794026 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00821 9 16624440 16627893 Pumo9g00821 9 16624440 16627893 ECH