Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00744 ATGCAACCCCAGCTGAGCTCGAGAATCAATTTGGTCGAATTGAAAGCGCAGATTGTGAAGAGGATTGGAGCAGATAAATCAAAGCGCTACTTTTATTACTTGAACAGGTTTCTGAGTCAGAAGCTGAGCAAGACTGAATTCGATAGGTCATGTTATCGGGTACTTGGCAAGGAGAATTTTCCGTTACACAATCACTTTATAAAGTCAATTTTGAAGAATGCCTGCCAAGCCAAGACCCCACCGCCAGTCCAGCTGACAGGTCATCCGAAATCAGGAGCACTTGTCAATAATGTATCTCCTGGTAGAGAGGATGGGCACGAACAGAGTGTCGCTAACTTCCAAAATCAGAAGGCTTCCATTTGGTCCAATGGGGTTTTGCCGGTTTCCCCACGCAAGTCAAGATCTGGAGTGCGTGATCGGAAGCTTAAAGATAGACCGAGCCCTCTTGGACCAAATGGAAAAGTTGATTCTGTTGCTCATCAATCCACAGCTACAGAAGACAGTGGTAGTAAGGTTGATATGGAGAATGGAATTCTTACTCCATGCGATTATCAGAGACCAATGCAGCATCTTCAGGCAGTTGATGAGCTACCTGTGAATGGTATGGGGGATGCTATTCAAAGACCTGCAGAAAAACCAAGAATACATGGTAAAGGGCCCACCGAAGTATCAATTGTTGAAGAAGGGGAAGAGGTGGAGCAGTTAAACCGCCTCAATTTCTCTAGAAGTCCCTTGATAGCACCACTTGGGATTCCTTACTGCACTGCAAGTGTTGGTGGGGCCCGCAAGGCATTGCCAGTGAATAGCACTAGTGATTTTGTTAGTTGTTGTGACAGTAGTAGGTTATCTGATACAGATACATTGAGAAGGCGCATGGAGCAGATCGCAACAGTTCAGGGTCTTGGAGGCATTTCAATGGAATGTGCAAATATGTTGAATAATGTATTAGATGTGTACTTGAAACAGTTGATAAGATCTTGTGTTGATTTAGTGGGAGCTAGGTCTGCAAATGAGCCGAGGAAGCTCCCTGTCTCGAAACAGCAGATTCAGGGGAAGGTCATTAATGGCGTCTGGCCAAATAATCATTTACATGTGCAGAGTGCTGGTGGGCTGGCAGAACCTGAGCCTGAACACAGACCACCGCGCTCAGTATCTTTACATGATTTTAAAGTTGCTATGGAGCTAAATCCACAGCAACTTGGAGAAGATTGGCCACTACAGTTGGAGAAAATTTCTATGCAATCATTTGAGGAATAA 1257 0.4479 MQPQLSSRINLVELKAQIVKRIGADKSKRYFYYLNRFLSQKLSKTEFDRSCYRVLGKENFPLHNHFIKSILKNACQAKTPPPVQLTGHPKSGALVNNVSPGREDGHEQSVANFQNQKASIWSNGVLPVSPRKSRSGVRDRKLKDRPSPLGPNGKVDSVAHQSTATEDSGSKVDMENGILTPCDYQRPMQHLQAVDELPVNGMGDAIQRPAEKPRIHGKGPTEVSIVEEGEEVEQLNRLNFSRSPLIAPLGIPYCTASVGGARKALPVNSTSDFVSCCDSSRLSDTDTLRRRMEQIATVQGLGGISMECANMLNNVLDVYLKQLIRSCVDLVGARSANEPRKLPVSKQQIQGKVINGVWPNNHLHVQSAGGLAEPEPEHRPPRSVSLHDFKVAMELNPQQLGEDWPLQLEKISMQSFEE 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00744 418 MobiDBLite consensus disorder prediction 156 170 - -
Pumo9g00744 418 MobiDBLite consensus disorder prediction 133 147 - -
Pumo9g00744 418 MobiDBLite consensus disorder prediction 122 174 - -
Pumo9g00744 418 MobiDBLite consensus disorder prediction 81 106 - -
Pumo9g00744 418 PANTHER TRANSCRIPTIONAL ADAPTER 1 3 417 IPR024738 GO:0070461
Pumo9g00744 418 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 6 331 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00744 Pumo-Chr9 14480847 14484376 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00744 - - gmx:100803746 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00744 9 14480847 14484376 Pumo9g00744 9 14480847 14484376 ECH
Pumo9g00744 9 14480847 14484376 Pumo10g00866 10 11409199 11411917 PCT