Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00727 ATGGGGGATGAGAAAGGTGAGAAGAAAGAAACTACTCCCAGTGCCGGTGCCACTGCGGCGAACGAAAACGAAAAGAAGGTGAATAAGGAGAAGAAGAAGGGGTTTATTTCGCGAATTTGGAACGCGATATTCAGGTCCAACCGCGATGATTTTGAGAAGAGGCTTCAGTATATTTCCAAAGAAGAAAACGCCGTCGTTTCTAGAATGAGCAACAGATCCCGCTCTTCGAGGCGAACCTCTCGCCAACTTATTCTATTTTCTGTTTTATTTGAGGTCATTGCTGTCTGTTATGCTATTATGACAACAAGATCAATGGATATGAATTGGAAAATGAGGGCAATCCGAGTTTTGCCAATGTTTCTTTTGCCTGCCTTGTCATCTGCTACATATTCAGCATTTGTCAGCTTCACAAGGATGTGTGATCGCAGGGACCAGAAAATTCTTGAAAGTCTTAGAGCTGAAAGGAAGGCAAAAATTGATGAGCTCAAAGAGAAGACAAATTATTACATTACTCAACAACTCATTCAGAGATATGATACAGATCCTGCAGCAAAGGCAGCTGCTGCAACTGTTTTAGCATCCAGGTTGGGTGCAGATTCGGGTTTGAAAGTGTATGTGGGGGACGAATCTGCTGGTGCTCCAACAGGGAAGACCAAGGATGTTCAAGTTGTGCAGTCTAGTGGGCTTCGAAATCGCAAACAAGTGAACTCTAGGTCCACTAGTCCAGGGACAACTACACCAAATTATTCCGGTCAACAATTAGTTGGCTCTGGGAAAGTAGATCAAACTCAAGCTCCTGAGCATAATCAGCTTGTAGTTGAACATCATCCTCAAAGTTCAACAATGAATGATGGAGGATGGATTGCTCGAATTGCAGCATTGCTTGTGGGTGAGGATCCAACACAGTCTTATGCGCTCATATGTGGTAACTGCCGTATGCATAATGGTCTTGCTCGGAAGGAGGATTTCCCATTTATTACTTATTACTGCCCACACTGTCATGCCCTGAACAAACCGAAGCAATCGGATGAGCATATATCTGGTGCAAATTCTCCAAACACTGGGTCTCCAAAAACAGATGACAGCGAAAAAGTTAAAAATGTCGGTGATTCTGCAGCTGAGAGCGTAATCAGAAGCGATGATCCTGTAAATACTAGCCCTGAGATTGAGGAAGTATCTGAACAGGCTATTTCAGGGGAAAAAAGCTAG 1209 0.4359 MGDEKGEKKETTPSAGATAANENEKKVNKEKKKGFISRIWNAIFRSNRDDFEKRLQYISKEENAVVSRMSNRSRSSRRTSRQLILFSVLFEVIAVCYAIMTTRSMDMNWKMRAIRVLPMFLLPALSSATYSAFVSFTRMCDRRDQKILESLRAERKAKIDELKEKTNYYITQQLIQRYDTDPAAKAAAATVLASRLGADSGLKVYVGDESAGAPTGKTKDVQVVQSSGLRNRKQVNSRSTSPGTTTPNYSGQQLVGSGKVDQTQAPEHNQLVVEHHPQSSTMNDGGWIARIAALLVGEDPTQSYALICGNCRMHNGLARKEDFPFITYYCPHCHALNKPKQSDEHISGANSPNTGSPKTDDSEKVKNVGDSAAESVIRSDDPVNTSPEIEEVSEQAISGEKS 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00727 402 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 29 397 IPR040115 GO:0071786
Pumo9g00727 402 MobiDBLite consensus disorder prediction 1 31 - -
Pumo9g00727 402 Coils Coil 145 165 - -
Pumo9g00727 402 MobiDBLite consensus disorder prediction 225 263 - -
Pumo9g00727 402 MobiDBLite consensus disorder prediction 339 402 - -
Pumo9g00727 402 MobiDBLite consensus disorder prediction 343 358 - -
Pumo9g00727 402 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 287 337 IPR019273 -
Pumo9g00727 402 MobiDBLite consensus disorder prediction 378 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00727 Pumo-Chr9 14148715 14153290 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00727 K23292 - gmx:100796079 670.233