Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00700 ATGAAGCTTAAAAGGTGGCTCGCGAGTGTTTTGTTCCTCATTGTTGCCACAGTGAGCAATGCAGCAGGTGCATTTGTGGGGGTAAACATTGGCACTGATGTTACTGATCTTCCATCTGCTTCCAATGTGGTTGCTATTCTAAAAGCACATCAAATTACACACGTGCGCCTATATAATGCCAATGAGCACATGCTACAAGCCCTTTCAAACACTGGCATTGAAGTGATTGTTGGTGTCACGGATGAAGAGATATTAGGCATTGGAGAATCTGCAACAGTTGCTGCAGCATGGATTAGTAAGAATGTGGCTGCATACATGCCATCCACTAACATCACAGCAATATCAGTTGGCAGTGAGGTTCTCACCTCAGTCCCAAATGTTGCACCTGTTCTGGTTCCTGCCATGAACCATCTTCACAAAGCACTTGTTGCTTCAAACCTTAACTTTCGCGTTAAGGTTTCAACGCCGCAGTCCATGGATGTAATTTCTAGGCCTTTTCCTCCTTCTACAGCCACCTTTAACTCCTCATGGAACTCCACAATCTACCAACTTCTTCAGTTTTTGAAGAACACAAATTCCTCTTACATGTTAAATGCCTACCCTTATTATGGATACACTAAAGGAGATGGCATTTTCCCAATTGAATATGCTCTATTCAGACCCCTCTCTCCAGTGAAGCAAATTGTTGACCCAAACACACTATTCCATTACAACAGCATGTTTGAGGCTATGGTGGATGCTACCTACTATGCCATAGAAGGCTTCAATTTCAATAATATACCTATTGTTGTCACAGAAACTGGTTGGCCAAGTTTTGGTGGAGCAAATGAGCCAGACGCTACTACAAAGAATGCTGAGACCTACAATAATAATTTGATTATGAGAGTACTCAATGGTTCAGGTCCCCCTAGTCAGCCAAAGATAGCCTTTAATACCTACCTATATGAATTATTCAATGAGGACAAGAGGAAAGGGCCTATATCAGAAAAGAATTGGGGTGTTTTTTATGCTAATGGAAGTAGTGTTTATCCCTTGAGTTTTAGTGCTTCCAACATGAGTAATGCAAATTCTCTAGGAACATTTTGTGTGGCTAAAGATGATGCAGACACTGATAAATTGCAAGCTGGCTTGAGCTGGGCCTGTGGACAAGGCCAAGCTAACTGTGTGACTATTCAACCAGGGAGACCTTGCTATTTCCCCAATAATGTGAAGAGCCATGCCTCTTATGCTTATAATGATTATTATCAAAAAATGCATAATGCTGGTGGAACATGTGACTTTGATGGTACAGCTACAACAACTACTGAGGATCCTAGTTATGGGTCCTGTATATATGCTGGAAGTGCAAACTCAAGCATTGGTGGAAGGAGTTCATCTTCTGCAGCACTTGGATTTGGACCTGTAAGTCCTGTTGGAGCTAGTTTGAACCTGCAAGTGTCCACCCTTCAGTATTTGATAACGTCTATTAGTGTATTTTTTGCTCTGGTGTTGTCATGA 1497 0.4188 MKLKRWLASVLFLIVATVSNAAGAFVGVNIGTDVTDLPSASNVVAILKAHQITHVRLYNANEHMLQALSNTGIEVIVGVTDEEILGIGESATVAAAWISKNVAAYMPSTNITAISVGSEVLTSVPNVAPVLVPAMNHLHKALVASNLNFRVKVSTPQSMDVISRPFPPSTATFNSSWNSTIYQLLQFLKNTNSSYMLNAYPYYGYTKGDGIFPIEYALFRPLSPVKQIVDPNTLFHYNSMFEAMVDATYYAIEGFNFNNIPIVVTETGWPSFGGANEPDATTKNAETYNNNLIMRVLNGSGPPSQPKIAFNTYLYELFNEDKRKGPISEKNWGVFYANGSSVYPLSFSASNMSNANSLGTFCVAKDDADTDKLQAGLSWACGQGQANCVTIQPGRPCYFPNNVKSHASYAYNDYYQKMHNAGGTCDFDGTATTTTEDPSYGSCIYAGSANSSIGGRSSSSAALGFGPVSPVGASLNLQVSTLQYLITSISVFFALVLS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00700 498 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 15 434 IPR044965 GO:0004553|GO:0005975
Pumo9g00700 498 Pfam Glycosyl hydrolases family 17 26 347 IPR000490 GO:0004553|GO:0005975
Pumo9g00700 498 SUPERFAMILY (Trans)glycosidases 26 346 IPR017853 -
Pumo9g00700 498 SMART X8_cls 360 445 IPR012946 -
Pumo9g00700 498 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Pumo9g00700 498 Gene3D Glycosidases 25 353 - -
Pumo9g00700 498 Pfam X8 domain 361 432 IPR012946 -
Pumo9g00700 498 Gene3D - 354 453 - -
Pumo9g00700 498 FunFam Glucan endo-1,3-beta-glucosidase 3 25 350 - -
Pumo9g00700 498 FunFam Glucan endo-1,3-beta-glucosidase 4 355 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00700 Pumo-Chr9 13819156 13822707 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00700 1 479 Glycoside Hydrolase AT3G13560 64.792 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00700 K19892 - gmx:100779131 918.687