Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00664 ATGGGTTGGAAAGCTGCTGAGAAACTCATTAGGCACTGGAAAGTTCTGAGAGGGGATAATGTTATGATAATAAGGGGCAAAGATAAGGGTGAGACTGGGACTATTAAGCGTGTCATTCGCTCTCAGAATCGTGTCATTGTTGAGGGTAAAAATCTGGTGAAAAAGCATATCAAGCAAGGGCAAGGTCATGAAGGGGGCATCTTTACAGTTGAAGCTCCAATCCATGCCTCCAACGTGCAAGTTGTTGACCCAGTGACAGGGAAGCCTTGCAAGGTTGGAATTAAATATCTTGAAGATGGTACTAAAGTCAGAGTATCTAGAGGAATAGGAGCATCTGGGTCCATAATCCCTCGACCTGAGATCTTAAAGATAAGAACTACCCCTCGACCTACTGTGCTTGGTCCCAAAGATACTCCGATGGATCTTGTGTTTGAGAAGACTTACGATGCTAAAACAGGAAGGGGCATGCCTGAGCTTTAA 480 0.4458 MGWKAAEKLIRHWKVLRGDNVMIIRGKDKGETGTIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPIHASNVQVVDPVTGKPCKVGIKYLEDGTKVRVSRGIGASGSIIPRPEILKIRTTPRPTVLGPKDTPMDLVFEKTYDAKTGRGMPEL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00664 159 Gene3D - 4 111 IPR014722 -
Pumo9g00664 159 Pfam Ribosomal proteins 50S L24/mitochondrial 39S L24 51 108 IPR003256 GO:0003735|GO:0005840|GO:0006412
Pumo9g00664 159 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L24 3 149 IPR003256 GO:0003735|GO:0005840|GO:0006412
Pumo9g00664 159 Hamap 50S ribosomal protein L24 [rplX]. 13 107 IPR003256 GO:0003735|GO:0005840|GO:0006412
Pumo9g00664 159 Pfam KOW motif 17 48 IPR005824 -
Pumo9g00664 159 NCBIfam 50S ribosomal protein L24 14 107 IPR003256 GO:0003735|GO:0005840|GO:0006412
Pumo9g00664 159 CDD KOW_RPL26 18 81 IPR041988 GO:0003723
Pumo9g00664 159 SMART kow_9 14 41 IPR005824 -
Pumo9g00664 159 SUPERFAMILY Translation proteins SH3-like domain 10 108 IPR008991 -
Pumo9g00664 159 ProSitePatterns Ribosomal protein L24 signature. 18 35 IPR005825 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00664 Pumo-Chr9 12456710 12460672 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00664 K02895 - gmx:100305917 311.612