Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00643 ATGAGAAGAATCTCGAATCTTCTCTCTAAATCGAAACAACTCGCTGCATTCGCAAACCCAGCCTCCAAATTTCGCGTCAATGCGCTTCGCTCTTATTGCGATCAATCGCAACTTCGCCGTCAGAACCGTCCAGGGCCGCTTGTGCAGTATAGAAGTCTAGTTGATCAAGGGAAGTTGCAGCACGATCCTTACCAAGAGAGTGTTGCTTCGGAGCTTGAGAATTTGCTTGCAAGGTTGGAGCAGTATGAGAAAGATATGGAAGAGTATCATGTGAATCTAGCTAATTGGGAGAAGCAGCGGGAGGATGAGCGGCGGAGGCTTCTCATGGAGGAAGTTGAGCTGCACCAGAAGGATGAGGACTGGTGGAAGCGGTTGAACAATAAGCTTACCGAAAGATGGGCATCCCGGAAAAGACCAAAAAGTATGGAGCCAGGGGTAGGGAAATGGGTATCATATCTCAAACGTGAGAAGAAGTTGGATTCGCTAGTTGGTCGCCGTCCAACTGCTCCTCCAGCTCCTAAAGGACTTTACATATATGGCAATGTCGGCAGTGGGAAGACAATGCTGATGGACATGTTTTATAGTGCCACTGAAGGAATTGTCAAACATCGAAGAAGGTATCACTTTCATGAGGCCATGCTTAGAATTAATGAACATATGCACAAGATATGGAAGAACCAAATAGAAGAGAAGCCTTTGCAATCGACCATTGCTGGTTGGATTATGAGTCTTCCATTTGACACGAAAGCTAAGGAGTGGTTGGCTGCTGAAGAAAGATACAAGCAAGAGGTACAGATGAAAAACATTCTTCCTGCTGTAGCAGATAAGTTTTTCCTGGATGGAGAAGAGAATGAAAAGGGAGCTAGCATTTTGTGCTTCGATGAGATACAGACTGTTGACGTATTTGCTATTGTGGCTTTATCTGGAATTCTAAGCAGATTGCTGAGTAGTGGAACTATAATTGTGGCTACCAGTAATAGAGCACCAAAGGACTTAAACGAGGCTGGTATGCAAAAAGAAATATTCCAGAAACTTGTCTCCAAATTGGAAGAACATTGTGAGAAGGTATTGATAGGGAGTGAAATTGACTACCGTCGTTTTATAGCACAAAAATCAGAAAACCAGGTGCACTATTTCTGGCCTATTGAAAAGGAAGCGATCAATGAATTTGAGAAAAAGTGGCATGATGTAACAGGCAGATTGGGAGGACGAATAATTTCCAACACCATCTCAGTGATGTTTGGAAGGACACTTGTGGTTCCTGAAAGCTTTGATGGAGTTGCACGCTTCACATTTGAGTATCTCTGCGGCCATCCGTTGGGTGCAGCAGATTATATTGCAGTAGCTGAAAATTTTCACACTGTTTTCATATCTGATATTCCAGTAATGAGTATGCGCATCCGTGACAAGGCACGGAGATTTATCACCCTTATTGATGAGTTATACAATCATCATTGCTGCCTGTGTTGTTTGGCATCCTCTTCAATAGATGAATTATTTCAAGGAACTGAAGAGGGCACACTTTTTGACTTGGAAAGTTTCCAGTTCGAAACAGAGACTGAAGGTGGGAAACTTCGCCGCAATGTCTTGGCAGAAGGCAGGGTGAGCTCAGGAGGTGCCCCTTCTGGTATCACATCCATACTATCTGGTCAAGAAGAGATGTTTGCTTTTCAAAGAGCTGTCTCACGCCTGATTGAAATGCAGACGCCATTATACTTGGATGAAATCAGTAATTTTCACCCATATTTTCAGAGGCAACATAAAAAGTTACAACAATTGTGA 1782 0.4332 MRRISNLLSKSKQLAAFANPASKFRVNALRSYCDQSQLRRQNRPGPLVQYRSLVDQGKLQHDPYQESVASELENLLARLEQYEKDMEEYHVNLANWEKQREDERRRLLMEEVELHQKDEDWWKRLNNKLTERWASRKRPKSMEPGVGKWVSYLKREKKLDSLVGRRPTAPPAPKGLYIYGNVGSGKTMLMDMFYSATEGIVKHRRRYHFHEAMLRINEHMHKIWKNQIEEKPLQSTIAGWIMSLPFDTKAKEWLAAEERYKQEVQMKNILPAVADKFFLDGEENEKGASILCFDEIQTVDVFAIVALSGILSRLLSSGTIIVATSNRAPKDLNEAGMQKEIFQKLVSKLEEHCEKVLIGSEIDYRRFIAQKSENQVHYFWPIEKEAINEFEKKWHDVTGRLGGRIISNTISVMFGRTLVVPESFDGVARFTFEYLCGHPLGAADYIAVAENFHTVFISDIPVMSMRIRDKARRFITLIDELYNHHCCLCCLASSSIDELFQGTEEGTLFDLESFQFETETEGGKLRRNVLAEGRVSSGGAPSGITSILSGQEEMFAFQRAVSRLIEMQTPLYLDEISNFHPYFQRQHKKLQQL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00643 593 Coils Coil 587 593 - -
Pumo9g00643 593 NCBIfam cell division protein ZapE 265 505 IPR005654 GO:0005524|GO:0016887
Pumo9g00643 593 Pfam AFG1-like ATPase 158 504 IPR005654 GO:0005524|GO:0016887
Pumo9g00643 593 Gene3D - 165 366 IPR027417 -
Pumo9g00643 593 PANTHER ATPASE N2B 27 581 IPR005654 GO:0005524|GO:0016887
Pumo9g00643 593 FunFam AFG1-like ATPase isoform C 165 366 - -
Pumo9g00643 593 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 349 IPR027417 -
Pumo9g00643 593 Coils Coil 65 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00643 Pumo-Chr9 11881373 11893031 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00643 - - mtr:11431777 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00643 9 11881373 11893031 Pumo9g00643 9 11881373 11893031 ECH