Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00630 ATGGCCACCACCGAGCACGAAACACGGTTAATAGTAGCCAACACCAAGAGCCCTCGCCGATCCTCTTCCTCCTCTCTCGCCATAATCGACGGCATTTTCGCGAGGAAGAGCTTCTTCTACGACAGGCTCCCCTCCCAGCCCCTCAGACTCACCGTCCTCAAACTCGACGGTTCATGCTTCCATATTCAAGTTTCGAAGACGGCGACCGTTGCGGAACTTAAGGACGCAGTGGAGGCGGTGTTCAGTCACGTGCCTCACAAGGGCCCAGCAAAAATTTCATGGGCGCATGTTTGGGGGCAGTTTTGCTTATGCTATGATGGACAGAAGCTAGTTACGGAGAAAGATTATCTTCGAAATTATGGCATCAAGGATGGTGACCAGCTTCGTTTCATCCGCCATGTCTCAAACCATTGCTGTTTCCAACAAAAGCGGTTGAAGAAAAGAGTTGTCTATTTGAAACAACACAGGAGAACATCACAAGTGGATAGCTATCAACCCAAAGGAGATTGTGATGATGATGAGATTGGTTCCGATGATGAAGCCACGGATAATGGGAAGAAGATGAAGCATCATACTGAAGAGGAAGAAGAAGAAGAAGAGTGCGTTGGAAAGAACAAATTAGCTGGCTTTTTGGGAGAGTTGTTCTCATACACTCCACTAGCAGTTGTGAGAAGAACCAGAACTAAAAGCAGGATTTGGCCAACCACTACGGTGCCCAAATGTTTGCTTGGTAGTTTTAGAAAGATTAGAAGTATTGTATGCTTTGGCAGGAGGAAGCACTATACTCGGAGACTTCCATGGAGACAGTAG 810 0.4716 MATTEHETRLIVANTKSPRRSSSSSLAIIDGIFARKSFFYDRLPSQPLRLTVLKLDGSCFHIQVSKTATVAELKDAVEAVFSHVPHKGPAKISWAHVWGQFCLCYDGQKLVTEKDYLRNYGIKDGDQLRFIRHVSNHCCFQQKRLKKRVVYLKQHRRTSQVDSYQPKGDCDDDEIGSDDEATDNGKKMKHHTEEEEEEEECVGKNKLAGFLGELFSYTPLAVVRRTRTKSRIWPTTTVPKCLLGSFRKIRSIVCFGRRKHYTRRLPWRQ 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00630 269 Gene3D - 43 141 - -
Pumo9g00630 269 SUPERFAMILY Ubiquitin-like 43 137 IPR029071 -
Pumo9g00630 269 CDD Ubl_SNRNP25 48 133 IPR040610 -
Pumo9g00630 269 Pfam Ubiquitin-like domain 48 134 IPR040610 -
Pumo9g00630 269 MobiDBLite consensus disorder prediction 160 198 - -
Pumo9g00630 269 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 15 253 IPR039690 GO:0000398|GO:0005689
Pumo9g00630 269 MobiDBLite consensus disorder prediction 180 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00630 Pumo-Chr9 10993400 10996947 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00630 - - gmx:100820296 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00630 9 10993400 10996947 Pumo9g00630 9 10993400 10996947 ECH
Pumo10g00089 10 1568832 1570130 Pumo9g00630 9 10993400 10996947 ECH
Pumo9g00630 9 10993400 10996947 Pumo10g00089 10 1568832 1570130 PCT