Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00592 ATGGCTTCTTCTTCGGTTCTCTCCGTCGCTGCTTCGCACGCTGTCTTTCCCTCTTCCTCTCTGTCCTCGCACAAGGGAAAGCCCAAGATTGGAGGCAACACTTTGAGATTTAACAAAGGATCCAACTCCTTCTCTAATGAAAGGTCTAGTGGTCGGATCTCTATGGCTGTTGCGGTTAATGTTTCTCGGTTTGAAGGCATACCTATGGCTCCTCCTGATCCAATTCTTGGAGTTTCTGAGGCATTTAAGGCGGACAACAGTGATGTCAAGCTCAATCTTGGAGTTGGGGCATACAGAACGGAAGAACTACAGCCATATGTGCTTAATGTTGTTAAGAAGGCAGAAAATCTTATGCTAGAGAGAGGGGATAACAAAGAGTATCTCCCAATTGAGGGTTTGGCTGCATTTAATAAGGCAACTGCAGAGTTGTTACTCGGAGCAGACAACCCAGCAATCAAACAGCAAAGAGTTGCCACTGTCCAAGGTCTTTCTGGAACTGGTTCTCTGCGACTAGGTGCAGCTCTGATAGAACGATATTTTTCTGGAGCAAAAGTTTTGATATCAGCTCCTACCTGGGGTAATCACAAGAATATTTTCAATGATGCTAGAGTCCAATGGTCTGAGTACCGATATTACGATCCCAAGACAGTTGGCTTGGATTTTGAGGGCATGATTGAAGATATAAAGTCAGCTCCAGAAGGATCTTTTGTGTTACTTCATGGATGTGCTCATAACCCTACTGGTATTGATCCGACACCAGAACAGTGGGAAAAAGTAGCTGATGTAATTCAAGAAAAGAACCACATTCCCTTTTTTGATGTTGCTTACCAGGGGTTTGCTAGTGGAAGCCTTGATGAAGATGCAGCTTCTGTGAGACTGTTTGTGGCACGTGGCATGGAGGTTCTTGTAGCCCAGTCATACAGTAAAAATCTTGGTCTCTATGCTGAAAGGATTGGAGCAATCAATGTGATTTCATCATCACCGGAATCTGCAACAAGGGTAAAGAGCCAGTTGAAAAGGCTTGCCCGACCAATGTACTCTAATCCACCCGTACACGGGGCTAGGATTGTTGCCGATGTTGTTGGAAACCCAGCTCTCTTTAATGAATGGAAAGCAGAGATGGAAATGATGGCTGGAAGGATAAAGAATGTTAGACAGCAGCTATATGATAGTATTACTTCAAAAGACAAGAGTGGAAAGGATTGGTCATTCATACTTAAGCAGATAGGCATGTTCTCATTCACGGGCTTGAACAAGAACCAGAGTGACAACATGACAAATAAGTGGCATGTATACATGACAAAGGATGGAAGGATTTCCCTGGCAGGATTGTCGTTGGCTAAATGCGAATACCTTGCGGATGCTATTATTGATTCATATCATAATGTCAGCTGA 1395 0.438 MASSSVLSVAASHAVFPSSSLSSHKGKPKIGGNTLRFNKGSNSFSNERSSGRISMAVAVNVSRFEGIPMAPPDPILGVSEAFKADNSDVKLNLGVGAYRTEELQPYVLNVVKKAENLMLERGDNKEYLPIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLSGTGSLRLGAALIERYFSGAKVLISAPTWGNHKNIFNDARVQWSEYRYYDPKTVGLDFEGMIEDIKSAPEGSFVLLHGCAHNPTGIDPTPEQWEKVADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLFVARGMEVLVAQSYSKNLGLYAERIGAINVISSSPESATRVKSQLKRLARPMYSNPPVHGARIVADVVGNPALFNEWKAEMEMMAGRIKNVRQQLYDSITSKDKSGKDWSFILKQIGMFSFTGLNKNQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00592 464 MobiDBLite consensus disorder prediction 18 46 - -
Pumo9g00592 464 Gene3D Aspartate Aminotransferase, domain 1 67 456 IPR015422 GO:0003824
Pumo9g00592 464 PRINTS Aspartate aminotransferase signature 237 256 IPR000796 GO:0006520|GO:0008483
Pumo9g00592 464 PRINTS Aspartate aminotransferase signature 268 280 IPR000796 GO:0006520|GO:0008483
Pumo9g00592 464 PRINTS Aspartate aminotransferase signature 336 361 IPR000796 GO:0006520|GO:0008483
Pumo9g00592 464 PRINTS Aspartate aminotransferase signature 405 423 IPR000796 GO:0006520|GO:0008483
Pumo9g00592 464 CDD AAT_like 91 456 - -
Pumo9g00592 464 Gene3D - 122 363 IPR015421 GO:0003824
Pumo9g00592 464 SUPERFAMILY PLP-dependent transferases 62 458 IPR015424 -
Pumo9g00592 464 Pfam Aminotransferase class I and II 90 456 IPR004839 GO:0009058|GO:0030170
Pumo9g00592 464 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 306 319 IPR004838 GO:0003824|GO:0009058|GO:0030170
Pumo9g00592 464 PANTHER ASPARTATE AMINOTRANSFERASE 57 462 IPR000796 GO:0006520|GO:0008483
Pumo9g00592 464 FunFam Aspartate aminotransferase 350 456 - -
Pumo9g00592 464 FunFam Aspartate aminotransferase 122 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00592 Pumo-Chr9 9959513 9964137 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00592 K00811 - gmx:547792 867.455