Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00588 ATGTTGTGTAAACTGGTTCCGGTGCCGCGCAAGAAAAAACCCGGTTCGAACCCGGTTTACCTTAACGTCTACGACCTAACCCCAATTAACGGTTACGCTTATTGGCTTGGCCTCGGAGTTTACCATTCTGGTGTTCAAGTTCATGGGATTGAGTATGGATTTGGAGCACATGAACGTGACACGACTGGGATTTTTGAAGTGGAGCCTAGAAACTGTCCTGGATTCACCTTCAGGAAATCGATTTTCATTGGATCGACGGACATGGGGCCGAAGGATGTTCGCGCATTCATGGAGAGGCTGGCTGAAGAGTATTCTGGGAACACCTACCACCTTATCCAGAAGAACTGCAACCACTTCTGCGAAGATGTTTGTGTCAGATTAACGGGAAAGTCTATCCCTCGATGGGTGAATCGGCTTGCTAGACTTGGTAAGGGATATAGGAGAGCTTGTTGTGATTATTTTGATTCTCAATATGATGGTTTTCTCTGCAACTGTGTTCTTCCACCCAGCCTAAACGAAACAAAGGTTCGCCAAGTTACGTTAGACAGGGTTCAAGAAGGAGGAGAAAAGAAGAAAATGAGAAGCCAGTCGAGCAGGTACGAGGCCTCACCCAATCCTCCATTGTCTAGTAGCCAAAGACATTGCCTTCCTCCATCTTCTTCTGTAATTAATGCTTCTCCATCCTCAACCTTAACAGTAAAGTAA 705 0.4596 MLCKLVPVPRKKKPGSNPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHGIEYGFGAHERDTTGIFEVEPRNCPGFTFRKSIFIGSTDMGPKDVRAFMERLAEEYSGNTYHLIQKNCNHFCEDVCVRLTGKSIPRWVNRLARLGKGYRRACCDYFDSQYDGFLCNCVLPPSLNETKVRQVTLDRVQEGGEKKKMRSQSSRYEASPNPPLSSSQRHCLPPSSSVINASPSSTLTVK 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00588 234 MobiDBLite consensus disorder prediction 198 234 - -
Pumo9g00588 234 ProSiteProfiles PPPDE domain profile. 17 145 IPR008580 GO:0008233
Pumo9g00588 234 SMART DUF862_2a 17 156 IPR008580 GO:0008233
Pumo9g00588 234 PANTHER DESUMOYLATING ISOPEPTIDASE 16 202 IPR008580 GO:0008233
Pumo9g00588 234 MobiDBLite consensus disorder prediction 183 197 - -
Pumo9g00588 234 Gene3D PPPDE domains 12 159 IPR042266 -
Pumo9g00588 234 MobiDBLite consensus disorder prediction 183 234 - -
Pumo9g00588 234 Pfam PPPDE putative peptidase domain 18 143 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00588 Pumo-Chr9 9874593 9876530 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00588 K22763 - gmx:100786432 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00588 9 9874593 9876530 Pumo10g00135 10 2044324 2048034 PCT