Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00559 ATGGTGAAACTTTTTGTTTTTGTTTCAAGCTGGTGGCAGCATTCAGCAAATTTAGCAAGTTATGAGCAGCAGGATGCTCACGAGTTTTTCATTTCGATGTTAGATGCTATCCACGAGAAAGAGGGCAAAACAAGGAATGGAAGCAAAGGCAATGGAGACTGTCAATGCATTGCTCATAAGGTGTTTTATGGGTTATTGAGATCAGATGTTACCTGTATGGCCTGTGGATTCACCTCAACAACCTATGACCCTTGTGTGGACATTTCACTTCACTTGGACACCAATGTCTCTTCAACAGAAAAGGGTAAAAAGCTTACCAAACAGAATGAAGATGGCAGTATGTCTACACTTTCAGGGTTGTTTAGATTTGTTCACAAGGCCAGAGAAGTTGGGGTCAGACCAGAAACTTTACTGCCAGAATTGTCGGGAAAGGCAGGACTCGTTGAAGCAAATGTCTATTAG 462 0.4199 MVKLFVFVSSWWQHSANLASYEQQDAHEFFISMLDAIHEKEGKTRNGSKGNGDCQCIAHKVFYGLLRSDVTCMACGFTSTTYDPCVDISLHLDTNVSSTEKGKKLTKQNEDGSMSTLSGLFRFVHKAREVGVRPETLLPELSGKAGLVEANVY 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00559 153 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 10 115 - -
Pumo9g00559 153 SUPERFAMILY Cysteine proteinases 4 96 IPR038765 -
Pumo9g00559 153 Pfam Ubiquitin carboxyl-terminal hydrolase 7 78 IPR001394 GO:0004843|GO:0016579
Pumo9g00559 153 Gene3D Cysteine proteinases 2 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00559 Pumo-Chr9 9353671 9354475 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00559 K11366 - gmx:100806347 230.72