Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00542 ATGCACCCAAATTTGCCATCGAGCAAGAAAATGTCAAAGCCTCGCATACCTAAATTTTGTCCCAATCGTGCACTCCCATCTAGGCCACTACAAGCCTTATCACCATCAAACCACCATCCATCCTTCCTCATCACCATCAAACCTCATCCATTCTTACAAATGAGGAAAAAGAAGATTGGGGAAAGTGAGTTAGAGAGAGAGAGAGAGAAAGAAAGATGGGTGCATTTTAGAAGAGACAGGGAGAGGGGAAGGAAGGAAGAAGCAAGCAGAGTATCTTCTTCTTGTGCGGTCTCTACTTCCTCTGCGTTTCTCGTCTCCGATTCCACCTTCCGAGTTGACTCAGTGCCATGGACGACCAAGAACAACAGCATCAAAAACCTCAACCCAACAACATCAACAGCAACACTGTTTCCGACTCCGACCCTTTCCTCCTCAACTACACAACCTCGGATCTCCGAACCGCTTCGGAGTTTCTCGCCACGTGGCTCCCCTTCCTCTCACGAGATCTCTGCACCCGCTGCACCCTATCCCTCTCCGATCGCATCCGCTCCATCGACCCAGGTGAAGCGCCTCAAAACGACAGCCCCCATGAGCAAAACGACGATGGAGGATAACTGTGACAACTGCGACACGCATTCTCTTGGAAGCTGGAAAGATGGGGCGCAGGTGAATTCCAATGTGGAGACTCGGAGCCAGAGAATTTCTTGGGCCGACATGGCCCAAGAAGAAGACGAGTTCGGCGAAGAAGAGAACAACAATGGTGTGAGTGCTGTGGTGGGTGATTCGAATGCTTCTTCTGATGTGGCTAAAGTTGTGACTGAGAAGCCTACTTTGCCTAGGGAGCAGAGGGAGTACATACGGTTCATGAATAGGGTTAATGGGAAGCTTGTGAACATTCTTGAAGGGCTTGAACTGCACACTGGGATTTTCAGTGCCGCCGAGCAGAAGAGGATTGTTAATTATGTTGCCTCATTGCAAGAGATGGGGAGAAAGGGAGAATTGAAAGAGCGGACGTTTTCAGCTCCCCAAAAGTGGATGAGGGGCAAGGGACGTCAAACCATCCAATTTGGGTGCTGCTACAATTATGCAATGGATAGAGATGGTAACCCACCTGGTATTCTTCCGAATGCAATGGTTGATCCTATACCTGATCTTTTCAAGGTCATCATTCGACGTTTGATCAAGTGGCATGTACTCCCTCCTACTTGTGTGCCAGATAGTTGCATTGTTAATATCTATGAAGAAGGGGACTGTATACCTCCACATATAGATAACCATGACTTTGTTCGACCATTTTGCACTGTCTCATTTCTTAGTGAGTGCAATATAGTTTTTGGATCAAACTTAAAGATTGTATGCCCTGGTGAATTTGATGGCCCAATTGCTATTCCGTTACCTATGGGATCTGTACTTGTCTTGAATGGAAATGGAGCTGATGTAGCTAAGCATTGTGTGCCTGCAGTTCCTAAAAAAAGGATATCAATCACCTTTCGAAGAATGGATGTGTCCAAGCGGCCTTTTGGGTATGTTCCAGAACCCGATCTTCAGGGGATCCAACCATTGGCCTATGAGGTTGAGCAGGAAAAGAAATCAAGTGGGCACAGACCTAGTCGTCATACAAACAGATATAATAAAGACAGGAGAGGAGGTGGCAGGAAGGATGCAATGGGATCTGCAACTAGAAATGATAGGTTCTCGGAGCCCTGTGACTCAAATCTAAGTTCACCGAGATCTTCAAATAGGTGGAGTAGGAAGCCCGGTAGTTGA 1767 0.4709 MHPNLPSSKKMSKPRIPKFCPNRALPSRPLQALSPSNHHPSFLITIKPHPFLQMRKKKIGESELEREREKERWVHFRRDRERGRKEEASRVSSSCAVSTSSAFLVSDSTFRVDSVPWTTKNNSIKNLNPTTSTATLFPTPTLSSSTTQPRISEPLRSFSPRGSPSSHEISAPAAPYPSPIASAPSTQVKRLKTTAPMSKTTMEDNCDNCDTHSLGSWKDGAQVNSNVETRSQRISWADMAQEEDEFGEEENNNGVSAVVGDSNASSDVAKVVTEKPTLPREQREYIRFMNRVNGKLVNILEGLELHTGIFSAAEQKRIVNYVASLQEMGRKGELKERTFSAPQKWMRGKGRQTIQFGCCYNYAMDRDGNPPGILPNAMVDPIPDLFKVIIRRLIKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTVSFLSECNIVFGSNLKIVCPGEFDGPIAIPLPMGSVLVLNGNGADVAKHCVPAVPKKRISITFRRMDVSKRPFGYVPEPDLQGIQPLAYEVEQEKKSSGHRPSRHTNRYNKDRRGGGRKDAMGSATRNDRFSEPCDSNLSSPRSSNRWSRKPGS 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00542 588 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 224 552 IPR044842 GO:0003729|GO:0006402|GO:0032451
Pumo9g00542 588 MobiDBLite consensus disorder prediction 543 560 - -
Pumo9g00542 588 Gene3D - 286 505 IPR037151 -
Pumo9g00542 588 MobiDBLite consensus disorder prediction 1 36 - -
Pumo9g00542 588 Pfam 2OG-Fe(II) oxygenase superfamily 303 498 IPR027450 -
Pumo9g00542 588 MobiDBLite consensus disorder prediction 131 166 - -
Pumo9g00542 588 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 404 501 IPR005123 -
Pumo9g00542 588 MobiDBLite consensus disorder prediction 564 588 - -
Pumo9g00542 588 MobiDBLite consensus disorder prediction 131 189 - -
Pumo9g00542 588 MobiDBLite consensus disorder prediction 525 588 - -
Pumo9g00542 588 SUPERFAMILY Clavaminate synthase-like 299 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00542 Pumo-Chr9 9047744 9052453 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00542 K10767 - gmx:100797674 692.575