Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00508 ATGCAGAGATTCAAAGCTCTGCTTCCGCAAACTAGGTCCTCACTTCGCACTCTCTGCTCTCACCGTCGAGCTTTCTCTGCTCAACCAAATTACGCAGAGCACCACGACGACGATTCTCAGGAACAGATTTTAGTTGAAGGAAGAGCGAAATCGAGAGCAGCTATTCTCAACAGGCCGTCTTCGCTGAACTCGCTCAATGCTTCAATGGTTGCTCGGTTGAAGAGACTGTATGATTCGTGGGAAGAAAACTCTGATATTGGCTTTGTTTTGATGAAGGGTAGTGGCAGAGCTTTCTGTTCTGGTGCAGATGTTCTTAGGCTGTATCACTCACTCAATGAAGGAAATACTGATGAAGCTGAACAGTTTTTCAAAACATTATATTCATTTGTATATCTTCAAGGGACATATCTTAAACCACATGTTGCCATTTTGGATGGAATAACAATGGGATGTGGATCTGGAATTTCTCTACCAGGGATGTTCCGTGTGGTAACTGATAAAACTATTTTTTCTCACCCAGAAGCTCAAATAGGTTTCCACCCAGATGCAGGAGCTTCTTATATTTTGTCTCGTCTACCTGGCTACTTAGGGGAATACTTGGCCCTTACAGGAGATAAGCTTAATGGTGTTGAAATGATTGCCTGCCGCCTTGCTACTCATTATTCACTAAATGCAAGGCTTGCTTTGCTTGAAGAACGTCTTGGTAAACTAATCACAGATGAACCTTCTGTTGTGGAGGCATCCCTTGCACAGTATGGTGATCTTGTTTATCCAGATAGGAGCAGTGTCCTTCACAGGATTGATACTATTGATAGATGTTTCAGTCATGAAACTGTGGAGGAAATTATTGAAGCTTTGGAGAAAGAGGCTGCTGAGTCTTATGACGAATGGTACTCGACTACTCTAAGGAGATTAAGAGAAGCCTCCCCGTTGAGTTTGAAAGTTACTTTACAATCTATACGTGAAGGTAGATTTGAAACTCTCGATAAATGTCTTGTACGTGAGTACCGCATGTCCCTACGTGGAATTTCAAAGCATGTCTCCTCTGATTTCTTTGAGGGTGTTCGAGCACGAATGGTTGATAAAGATTTTGCACCAAAGTGGGACCCACCTAGTTTAAAAGATATATCAGAGGACATGGTTGAATACTATTTCTCTCCGTTAAGCGAAGTTGGGTCTGAACTAGTGCTGCCAACGGCTTTGCGAGAACCTTACATGTGA 1221 0.4267 MQRFKALLPQTRSSLRTLCSHRRAFSAQPNYAEHHDDDSQEQILVEGRAKSRAAILNRPSSLNSLNASMVARLKRLYDSWEENSDIGFVLMKGSGRAFCSGADVLRLYHSLNEGNTDEAEQFFKTLYSFVYLQGTYLKPHVAILDGITMGCGSGISLPGMFRVVTDKTIFSHPEAQIGFHPDAGASYILSRLPGYLGEYLALTGDKLNGVEMIACRLATHYSLNARLALLEERLGKLITDEPSVVEASLAQYGDLVYPDRSSVLHRIDTIDRCFSHETVEEIIEALEKEAAESYDEWYSTTLRRLREASPLSLKVTLQSIREGRFETLDKCLVREYRMSLRGISKHVSSDFFEGVRARMVDKDFAPKWDPPSLKDISEDMVEYYFSPLSEVGSELVLPTALREPYM 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00508 406 Coils Coil 276 296 - -
Pumo9g00508 406 CDD crotonase-like 56 220 - -
Pumo9g00508 406 Gene3D - 37 398 - -
Pumo9g00508 406 SUPERFAMILY ClpP/crotonase 48 371 IPR029045 -
Pumo9g00508 406 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 37 400 IPR032259 GO:0003860
Pumo9g00508 406 FunFam Probable 3-hydroxyisobutyryl-CoA hydrolase 2 37 401 - -
Pumo9g00508 406 Pfam Enoyl-CoA hydratase/isomerase 53 385 IPR045004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00508 Pumo-Chr9 8122278 8130011 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00508 1 406 Acyl Lipid Metabolism Gene Families AT4G31810 70.316 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00508 K05605 - gmx:100808892 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00508 9 8122278 8130011 Pumo9g00508 9 8122278 8130011 ECH