Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00463 ATGAAGCTTTGGTGCTGTCTATGGTTTTGCTTCACTGAAGAAAAAGAAGACCGTAACGTTCTGAAACCTATGAAGGAAGAGGACATTTTCGGAAACGACGTCGTTTCCGACGACGACGGAAATGATAGCCGCGACGAGGAGCAATTCGAGATGGCGCGCGCCGATGCATTGGGCTCGTGGTCCGGCGAGAGCAGCTCCGCCGCCGCCGCGTGTTCGGACAGCGCCGCCGCCGCCGGCGAGAGCCGCGATTTGAGCCACAAGCGCGCCAAGTTCTACGCCGATTTCGAGGAGCGTCACTTTTCAACGAATGCCGGGAAATGCGGTGCATCTAATGAATACGGTGATTATGACTATATTAAAGGCACTCTTCGACCCAACGGTGAGACTTGTTATGATGCATTTGCATTGATGGGTGCTGTTGAGGAGAGTAGCAGCTTCGATTCCAGCATTGTGAAAGAGGGTGAAGGAGATGATAGTGATATCTCGAAAGTGGAAGATGTAGAGGTCAGAATGGATCTCACCGATGACTTGTTGCATATGGTTTTCTCGTTTTTGGATCATCCCAATCTCTGCAAAGCTGCCAGGGTTTGTAAGCAGTGGCGAACAGCCAGTGCTCATGAAGATTTCTGGAAGAGTTTGAATTTTGAAGATCGGAACATATCTGTAGAACAATTCGAGGACATGTGTAGGCGTTATCCTAATGCCACAGCAGTGAGCATATCTGGTTCTGCTATTTACTTGCTTGTCATGAAGGCCATCTCTTCATTAAGGAATCTAGAGGTTCTAACATTAGGAAGAGGACAGATAGCTGATACTTTTTTCCATGCTTTGGCTGAGTGTTCTATGTTGAGAAGATTGAACATCAATGATTCTACCCTTGGCAATGGCATTCAGGAGATAACTATCAATCATGACAGATTATGTCATCTTCAAGTAACAAAATGCCGTGTGATGCGAATAGCAGTCAGGTGCCCACAACTTGAAACTATGTCGTTGAAGCGCAGTAACATGGCACAGGTTGTGCTTAATTGTCCACTTTTGCAAGAGCTTGATATAGGCTCTTGCCACAAACTTCCTGATGCTGCAATTCGAGCTGCTGCAACTTCATGCCCTCAACTGGTCTCACTGGACATGTCAAATTGTTCATGTGTCAGTGATGAAACGCTGCGTGAAATAGCATTGAGTTGTGCTAACCTTAGTTTTCTTGATGCATCATACTGCCCAAACATATCCTTGGAGTCTGTTAGACTGCCGATGTTGACAGTTCTAAAGCTTCATAGTTGTGAGGGCATCACTTCTGCCTCAATGGCTGCAATAGCTCATAGTTATATGTTGGAGGTTTTGGAGCTCGACAATTGCAGCCTGTTGACTTCAGTGTCTTTGGATCTTCCTCGTTTGCAAACTATTAGATTGGTACACTGTCGCAAATTTGCTGATTTGAACTTGAGGACTATGATGCTTTCTTCTATACTGGTATCAAACTGCCCTGCACTCCATCGTATCAACATCACTTCAAATTCACTTCAAAAATTAGCATTGCAAAAGCAAGATAGTTTAACCACGTTAGCTCTGCAATGCCTATCTTTACAAGAAGTGGACCTCTCAGAGTGTGAATCTTTGACAAACTCTATATGTGATGTTTTTAGTGATGGTGGAGGATGCCCTATGCTGAAATCACTAGTTCTTGATAATTGTGAGAGCTTGACATCAGTTCGGTTCATCAGCACCTCCTTAGTCAGTCTTTCCCTTGGTGGTTGTCGGGCAATTACTACTCTTGAGCTCACATGTCCTAACCTTGAGAAAGTCATTTTGGATGGTTGTGATCATTTGGAAAGAGCATCCTTTTGTCCTGTTGGTCTTCGGTCTCTCAATTTAGGAATATGTCCAAAATTGGATATACTCAGCATAGATGCCATGTTTATGGTCTCGCTTGAGTTGAAAGGATGTGGTGTACTGTCTGAAGCATCACTTAATTGTCCTCTCTTGACATCTCTGGATGCTTCCTTTTGCAGCCAACTCACTGATGAATGCTTGTCTGCAACAACAGCCTCATGCCCATTGATTGAGTCATTAATATTGATGTCATGCCCATCAATTGGTTTAGATGGACTTTGTTCGTTGCGTTGGCTCCCAAATTTGACCCTGCTGGATTTGTCGTACACTTTTTTGGTCAATTTGCAGCCTGTTTTTGAGTCTTGTTCACAGCTAAAGGTGTTAAAGTTGCAGGCATGCAAATATCTCACTGACTCATCACTCGAACCTCTTTACAAAGGGGGTGCTTTACCAGCACTACAGGAGTTGGACTTGTCTTATGGAACACTCTGTCAGTCTGCCATAGAGGAGCTTCTTTCTTGCTGCACACACCTTACACGTGTGAGCTTGAATGGCTGTGCCAATATGCATGATTTAAACTGGGGATGCAGTCGTGGGCATATTGCTGAATTGCCTGGTGTAAATGTCCTATCCATTGCAAGTTCCCATGAAAATGTCCACGAGTTAAGTGAGCAACCCACCCGATTGCTGCAGAACCTAAACTGTGTGGGATGTCCGAACATTCGGAAAGTTTTCATTCCATCTACGGCACATTGTTCCCGTTTGTTGTTTTTAAATCTTTCTCTATCAGCTAATTTGAAGGAGGTTGATGTAGCTTGTCTCAACCTAAGCTGGCTTAATCTAAGCAATTGTTCTTCTTTGGAAGTTTTGAAGCTAGAGTGTCCGAGATTGACCAGTCTATTCCTTCAGTCTTGCAACATTGATGAGGAAGCTGTTGAGGCTGCTATATCAAAATGCACTATGCTGGAGACTCTTGACGTTCGCTTCTGTCCAAAGATAAGCTCAATGAGCATGGGAAGATTTCGTGCTGCATGTTCTAGTTTGAAGCGTATATTCAGCAGCTTGTCAACTTCATAA 2910 0.4416 MKLWCCLWFCFTEEKEDRNVLKPMKEEDIFGNDVVSDDDGNDSRDEEQFEMARADALGSWSGESSSAAAACSDSAAAAGESRDLSHKRAKFYADFEERHFSTNAGKCGASNEYGDYDYIKGTLRPNGETCYDAFALMGAVEESSSFDSSIVKEGEGDDSDISKVEDVEVRMDLTDDLLHMVFSFLDHPNLCKAARVCKQWRTASAHEDFWKSLNFEDRNISVEQFEDMCRRYPNATAVSISGSAIYLLVMKAISSLRNLEVLTLGRGQIADTFFHALAECSMLRRLNINDSTLGNGIQEITINHDRLCHLQVTKCRVMRIAVRCPQLETMSLKRSNMAQVVLNCPLLQELDIGSCHKLPDAAIRAAATSCPQLVSLDMSNCSCVSDETLREIALSCANLSFLDASYCPNISLESVRLPMLTVLKLHSCEGITSASMAAIAHSYMLEVLELDNCSLLTSVSLDLPRLQTIRLVHCRKFADLNLRTMMLSSILVSNCPALHRINITSNSLQKLALQKQDSLTTLALQCLSLQEVDLSECESLTNSICDVFSDGGGCPMLKSLVLDNCESLTSVRFISTSLVSLSLGGCRAITTLELTCPNLEKVILDGCDHLERASFCPVGLRSLNLGICPKLDILSIDAMFMVSLELKGCGVLSEASLNCPLLTSLDASFCSQLTDECLSATTASCPLIESLILMSCPSIGLDGLCSLRWLPNLTLLDLSYTFLVNLQPVFESCSQLKVLKLQACKYLTDSSLEPLYKGGALPALQELDLSYGTLCQSAIEELLSCCTHLTRVSLNGCANMHDLNWGCSRGHIAELPGVNVLSIASSHENVHELSEQPTRLLQNLNCVGCPNIRKVFIPSTAHCSRLLFLNLSLSANLKEVDVACLNLSWLNLSNCSSLEVLKLECPRLTSLFLQSCNIDEEAVEAAISKCTMLETLDVRFCPKISSMSMGRFRAACSSLKRIFSSLSTS 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00463 969 SMART LRR_CC_2 596 621 IPR006553 -
Pumo9g00463 969 SMART LRR_CC_2 930 965 IPR006553 -
Pumo9g00463 969 SMART LRR_CC_2 463 488 IPR006553 -
Pumo9g00463 969 SMART LRR_CC_2 659 684 IPR006553 -
Pumo9g00463 969 SMART LRR_CC_2 417 442 IPR006553 -
Pumo9g00463 969 SMART LRR_CC_2 370 395 IPR006553 -
Pumo9g00463 969 SMART LRR_CC_2 280 303 IPR006553 -
Pumo9g00463 969 SMART LRR_CC_2 733 758 IPR006553 -
Pumo9g00463 969 SMART LRR_CC_2 905 929 IPR006553 -
Pumo9g00463 969 SMART LRR_CC_2 526 550 IPR006553 -
Pumo9g00463 969 SMART LRR_CC_2 554 584 IPR006553 -
Pumo9g00463 969 SMART LRR_CC_2 786 826 IPR006553 -
Pumo9g00463 969 SMART LRR_CC_2 344 369 IPR006553 -
Pumo9g00463 969 SMART LRR_CC_2 685 710 IPR006553 -
Pumo9g00463 969 SUPERFAMILY F-box domain 164 227 IPR036047 GO:0005515
Pumo9g00463 969 FunFam F-box/LRR-repeat protein 15 isoform C 822 965 - -
Pumo9g00463 969 CDD F-box_FBXO41 175 214 - -
Pumo9g00463 969 FunFam F-box/LRR-repeat protein 15 576 724 - -
Pumo9g00463 969 Gene3D Ribonuclease Inhibitor 164 413 IPR032675 -
Pumo9g00463 969 ProSiteProfiles F-box domain profile. 167 213 IPR001810 GO:0005515
Pumo9g00463 969 SUPERFAMILY L domain-like 490 640 - -
Pumo9g00463 969 SUPERFAMILY RNI-like 220 475 - -
Pumo9g00463 969 SMART fbox_2 173 213 IPR001810 GO:0005515
Pumo9g00463 969 FunFam F-box/LRR-repeat protein 15 726 811 - -
Pumo9g00463 969 FunFam F-box/LRR-repeat protein 15 165 414 - -
Pumo9g00463 969 Pfam F-box-like 175 215 IPR001810 GO:0005515
Pumo9g00463 969 PANTHER OS10G0396666 PROTEIN 155 969 - -
Pumo9g00463 969 FunFam F-box/LRR-repeat protein 15 416 575 - -
Pumo9g00463 969 SUPERFAMILY L domain-like 652 962 - -
Pumo9g00463 969 Gene3D Ribonuclease Inhibitor 494 622 IPR032675 -
Pumo9g00463 969 Gene3D Ribonuclease Inhibitor 414 493 IPR032675 -
Pumo9g00463 969 Gene3D Ribonuclease Inhibitor 628 726 IPR032675 -
Pumo9g00463 969 Gene3D Ribonuclease Inhibitor 727 967 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00463 Pumo-Chr9 7180385 7188200 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00463 - - gmx:100782842 1772.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00463 9 7180385 7188200 Pumo9g00463 9 7180385 7188200 ECH