Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00450 ATGGAACAAGGCTTCCCCAAAAGCAAGTTCAAGAGGCTCTGTGTCTTTTGCGGCAGCAACTCCGGCAACCGCCAAGTTTTCAGTGACGCCACCATTGAATTGGCCAATGAACTGGTTAAGAGGAACATTGACTTGGTGTATGGTGGGGGAAGTGTTGGGCTGATGGGCCTAATATCTCAGAGAATGTATGATGGAGGCTGCCATGTTCTTGGGGTTATTCCAAAAGCTCTCATGCCTCATGAGATATCTGGTGAACCAGTTGGTGAAGTAAGAATTGTTTCAGATATGCATGAGCGTAAAGCTGCAATGGCTCAAGAAGCTGATGCATTTATCGCTCTCCCTGGAGGATATGGAACTATGGAAGAGCTGTTGGAGGTGATAACTTGGGCCCAACTTGGAATTCATAAAAAACCGGTTGGTCTACTGAATGTTGATGGTTACTATAACTCCTTGCTTGCATTATTTGACAATGGTGTTGAAGAAGGCTTCATTAAGCGTGGTGCTCGGAATATACTTGTTGCGGCTTCATCAGCCAAGGAACTTATGATGAAGATGGAGCAATATTCTCCTTCCCATGAACATGTAGCCCCTCATGATAGCTGGCAGACAAGGCAATTGGGCAATTATGCAGGACAGCAAAATGCAGAATGA 651 0.4531 MEQGFPKSKFKRLCVFCGSNSGNRQVFSDATIELANELVKRNIDLVYGGGSVGLMGLISQRMYDGGCHVLGVIPKALMPHEISGEPVGEVRIVSDMHERKAAMAQEADAFIALPGGYGTMEELLEVITWAQLGIHKKPVGLLNVDGYYNSLLALFDNGVEEGFIKRGARNILVAASSAKELMMKMEQYSPSHEHVAPHDSWQTRQLGNYAGQQNAE 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00450 216 SUPERFAMILY MCP/YpsA-like 9 188 - -
Pumo9g00450 216 Pfam Possible lysine decarboxylase 55 185 IPR031100 -
Pumo9g00450 216 FunFam Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 10 204 - -
Pumo9g00450 216 Gene3D - 9 204 - -
Pumo9g00450 216 PANTHER LOG FAMILY PROTEIN YJL055W 7 209 - -
Pumo9g00450 216 NCBIfam Rossman fold protein, TIGR00730 family 12 188 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00450 Pumo-Chr9 6983133 6985990 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00450 K22522 - gmx:100819765 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00450 9 6983133 6985990 Pumo10g00247 10 3359457 3362397 PCT