Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00442 ATGTCTGTCTATAACAATAACATGGATTTCCCCTCAATTAACTTCCTCTACGATGCAAGGCCTACGCCACTGCTCAAACGACGTCGTCCAGCTAGACCTCTCCACCCCAAGCACCACCACCACTGCCGTCACCAATCAAACACCTCCTCTTCCTCTTCTTCTCTCTCCATCGACGTGGACGAATCAACGGAGGCCCGCATCCAGCGCCTGATCTCGGAGCACCCCGTGATAATCTTCACGCGCTCCTCCTGCTGCATGTGCCACGTCATGAAGAAGCTCCTCGCCACCATCGGCGTCAACCCCACCGTCATCGAATTGGACGACCACGAGATCCAAGCCCTCCCCCACACCCGCAACTCCACCCCCGCCGTCTTCATCGGCGGCGCCTCCATCGGCGGCCTCGAGTCCCTCGTCGCCCTCCACGTCTCCGGCCACCTCGTCCCCAAACTCGTCCAAGTCGGCGCCCTCTGGAGTGGTCAAATGGGGGGGACTTGGAATCGATCTGCGAGTATGGTTGGGCGTGAAGGATACTCGCGGGTTTTGAGTGACACGTGTTGGGAGAGAGCATCTGTGTTCAGTGACCGTGAGAGCGACAACGGTGTGGCTCGGTTCAGTGTGGGGGTGAGTTTATCATCACGGGATGGATCATGGATCCCTCGCTGGATTGGGTGCCATTATTATGCAATCACAGGCCATAGCTTTGTAACTTTTGCTTGA 717 0.5718 MSVYNNNMDFPSINFLYDARPTPLLKRRRPARPLHPKHHHHCRHQSNTSSSSSSLSIDVDESTEARIQRLISEHPVIIFTRSSCCMCHVMKKLLATIGVNPTVIELDDHEIQALPHTRNSTPAVFIGGASIGGLESLVALHVSGHLVPKLVQVGALWSGQMGGTWNRSASMVGREGYSRVLSDTCWERASVFSDRESDNGVARFSVGVSLSSRDGSWIPRWIGCHYYAITGHSFVTFA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00442 238 PANTHER GLUTAREDOXIN 66 157 IPR011905 -
Pumo9g00442 238 MobiDBLite consensus disorder prediction 29 45 - -
Pumo9g00442 238 Gene3D Glutaredoxin 57 158 - -
Pumo9g00442 238 CDD GRX_GRXh_1_2_like 75 149 - -
Pumo9g00442 238 NCBIfam glutaredoxin-like family 67 157 IPR011905 -
Pumo9g00442 238 ProSiteProfiles Glutaredoxin domain profile. 64 157 - -
Pumo9g00442 238 SUPERFAMILY Thioredoxin-like 64 157 IPR036249 -
Pumo9g00442 238 Pfam Glutaredoxin 76 129 IPR002109 -
Pumo9g00442 238 MobiDBLite consensus disorder prediction 29 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00442 Pumo-Chr9 6914200 6917198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00442 67 157 Miscellaneous Gene Families AT4G15690 45.918 8.52e-23 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00442 - - vum:124825497 192.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00442 9 6914200 6917198 Pumo10g00255 10 3437804 3439323 PCT