Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00441 ATGAAGATCATTCCAGAGCTACTATTATTTGTGATAGTTCCTTTTCTGCTGAACAGTGGAAATGGAATTGAAACATCCACTCATAGCATCAATAATAGAGCATCTGAAAAGCAACCTTACCGAACTTCTTTTCACTTTCAGCCCCATCAAAATTGGATGAACGGACCTATGTACTACAAAGGTGTTTACCACCTTTTCTACCAACACAATCCTGAAGCAGCAACCTTTGGTGATGGGATTGTATGGGGTCACTCAGTATCCTATGATCTCATCAATTGGATTCATCTAAATAATGCTATTGAACCAAGTGGGCCATATGATATTAATAGCTGCTGGTCAGGCTCAGCCACTATAATCCCAGGGAAAGAAGAACCTGTTATTTTGTACACAGGAATTGATGATAAGAAACATCAAGTTCAGAACTTAGCTATGCCAAAGAATCTATCAGACCCCTTCTTAAGGGAATGGATCAAACACCCTCAGAACCCTGTCATGACTCCACCAAGTGGAGTTGAAGTTGATAATTTCAGAGACCCTTCAACTGCTTGGCAGGGAAAGGATGGAAAATGGAGGGTAGTCATTGGTGCTCAAAATGGTGATGAAGGGAAGACAATTCTCCACCAAAGTGAGGATTTTGTGAATTGGACAGTGGATCCTAACCCTTTTTATGCATCAGATAATACTGGAGTTTGTGAGTGTCCTGACTTCTTTCCTGTGTACATCAATGGCAGCACAAATGGGGTGGATACATCTGTGCAAAATCCAAGTGTTAGACATGTCTTGAAGATAAGCTATCTAAGAAAACAACATGATTACTATTTTCTTGGTAAATATGTATCTGATCAGGAAAACTTTACTCCTGATGTTAGGTTTACAGGGACTAGTTCGGACTTAAGGTATGACTATGGTAAATTCTATGCTTCCAAGTCATTTTTTGACTATGCCAAAAACAGGAGGATTTTGTGGGGATGGGTGAACGAGTCTGACTCCACACAAGATGACATTGAGAAAGGATGGGCTGGTCTACAGTCAATTTCAAGGCAAGTTTGGCTTGATAAAAGTGGGAAGAGATTGGTGCAGTGGCCAATTGAAGAGGTAGAAAAACTACGTGACAAGCACATAAGTATAACGGGAGAGGAACTCATCCATGGATCAAATCTTGAAGTCTCAGGTATCACTGCATCACAGGCCGATGTAGATGTGTTGTTTGAGCTACCTGAACTAGAAAATGCTGAGTTTCTTGATCCCAATGGAGTTGATCCCCAACTACTCTGTAGCCAAGAATATGCATCAAGAAGTGGCATAATAGGGCCATTTGGTTTGTTAGCTTTAGCTTCAAAGGATCTCAAAGAGCACACTGCAATCTTCTTCAAAATATATAGAGCTCCCAATAGATATGTTGGTCTGATGTGCAGTGACCAAAGCAGGTCCTCATTGCGGCATGACCTTGACAAAACTACATATGGAACTATCTTTGACATAGATCCCAATCTCAAAAAGATTTCACTTAGAAGCTTGATTGACCACTCCATTATTGAGAGTTTTGGGGATGAAGGGAGAGTTTGTATCACTAGTAGAGTTTATCCATCATTGGCTATAGACAAAGATGCCCATCTTTATGTATTTAACTATGGAAGCCAGAGTGTGGTGGTCTCAAAAATGAACGCTTGGAGCATGAAGCAAGCAGAGATTGGCCATGAGGGAAACATAAGCTATGCCTAA 1722 0.4065 MKIIPELLLFVIVPFLLNSGNGIETSTHSINNRASEKQPYRTSFHFQPHQNWMNGPMYYKGVYHLFYQHNPEAATFGDGIVWGHSVSYDLINWIHLNNAIEPSGPYDINSCWSGSATIIPGKEEPVILYTGIDDKKHQVQNLAMPKNLSDPFLREWIKHPQNPVMTPPSGVEVDNFRDPSTAWQGKDGKWRVVIGAQNGDEGKTILHQSEDFVNWTVDPNPFYASDNTGVCECPDFFPVYINGSTNGVDTSVQNPSVRHVLKISYLRKQHDYYFLGKYVSDQENFTPDVRFTGTSSDLRYDYGKFYASKSFFDYAKNRRILWGWVNESDSTQDDIEKGWAGLQSISRQVWLDKSGKRLVQWPIEEVEKLRDKHISITGEELIHGSNLEVSGITASQADVDVLFELPELENAEFLDPNGVDPQLLCSQEYASRSGIIGPFGLLALASKDLKEHTAIFFKIYRAPNRYVGLMCSDQSRSSLRHDLDKTTYGTIFDIDPNLKKISLRSLIDHSIIESFGDEGRVCITSRVYPSLAIDKDAHLYVFNYGSQSVVVSKMNAWSMKQAEIGHEGNISYA 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00441 573 CDD GH32_Fruct1-like 51 351 - -
Pumo9g00441 573 Gene3D Glycosyl hydrolase domain; family 43 49 374 IPR023296 -
Pumo9g00441 573 Pfam Glycosyl hydrolases family 32 N-terminal domain 45 362 IPR013148 -
Pumo9g00441 573 Gene3D - 375 559 - -
Pumo9g00441 573 SUPERFAMILY Arabinanase/levansucrase/invertase 36 363 IPR023296 -
Pumo9g00441 573 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 32 564 - -
Pumo9g00441 573 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 374 559 - -
Pumo9g00441 573 SUPERFAMILY Concanavalin A-like lectins/glucanases 362 561 IPR013320 -
Pumo9g00441 573 Pfam Glycosyl hydrolases family 32 C terminal 365 558 IPR013189 -
Pumo9g00441 573 SMART glyco_32 45 519 IPR001362 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00441 Pumo-Chr9 6905525 6908781 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00441 57 564 Glycoside Hydrolase AT3G13790 56.867 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00441 K01193 - gmx:100777487 1115.91