Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00440 ATGGAGATCAATGGAGAGGGTGTATCCCCACACAGCATAAGTTCTATCAAGTTCAAGGTACCTGAGAAACAGCCTTATAGAACTTGGTACCACTTTCAACCCCCAAAAAATTGGATGAACGATCCAAATGCACCTATGTACTACAAAGGAGTTTACCATTTTTTCTACCAACATAACCCCTATGCAGCAACCTTTGGCGAGAAAATGGTATGGGCTCACTCGGTGTCCTATGATCTCATCAATTGGATTCATCTGAATCATGCTATTGAACCAAGTGAGCCCTGTGACATCAACAGCTGCTGGTCAGGCTCAGCCACAATACTCCCAGGTGAAGAAGAACAACCTGTTATTTTGTACACAGGAATCGATAACAATAAACATCAAGTTCAGAACATAGTTAAGCCAAAGGATCTATCAGACCCCTTCTTAAGGGAATGGGTGAAACACCCTCAGAACCCTGTCATGACTCCACCAAGTGGAGTTGAAGTGAATAACTTTAGAGACCCTTCAACTGCTTGGCAGGGAAAGGATGGAAAATGGAGGGTAGTCATTGGTGCTCAAAATGGTGATGAAGGGAAGGCAGTTCTTTACCAAAGTGAGGATTTTGTTAATTGGACAGTGGAATTGAACCCTTTTTTTGCAACAGATAATACTGGAGTTTGTGAGTGTCCAGATTTTTTTCCTGTGTCCATCAATGGTGCAAATGGGGTGGATACATCTGTCCAAAGTCAAAGTGTTAGACATGTCTTGAAGATAAGCTATCTAAGAAGACATGTGGACTATTATTTTCTTGGTAAATATGTCTATGATGAGGGAAACTTTATTCCTGATGTTAAATTCACAGGAACTAGTTCGGACTTAAGGCTTGACTATGGTAAATTTTATGCTTCAAAGTCATTTTTTGACCATGCTAAGAATAGGAGGATATTGTGGGGGTGGGTGAACGAGTGTGACACTAGAGAAAATGACATTGAGAAAGGATGGGCTGGTCTACAGTGTATTCCAAGGCAAGTTTGGCTTGATGAAAGTGGGAAGCGGTTGATGCAGTGGCCAATTGAAGAAGTAGAAAAACTACGTGGCAAACAAGTTAGCATAATGGGAGAGAAACTGGTTGGTGGATCAACTATTGAAGTCTCAGGTATCACTGCATCACAAGCCGATGTAGAAGTGTTGTTTGAGCTACCAGAACTAGAGAATGCAGAGTGGCTAGATGAAAGTGAAGTTGATCCCCACTTGCTGTGTAGTGAAGAATATGCATCAAGAAGTGGCATAATAGGGCCATTTGGTTTGTTAGCTTTAGCTTCTGAGGACCAAACAGAACACAGTGCAGTCTTCTTCAGAATATATAGAGCTCCTAATAGATATGTATGCTTCATGTGCAGTGACCAGAGCAGGTCTTCATTGCGGCAGGACCTTGATAAAACCACATATGGAACCATCTTTGACATTGATCCCAATCTCAAAACGATTTCACTTAGAAGCTTGTTTCCCATCGCTACGACATTTCTTCACCACAACCACAAGCTTAAACATGACTTCTTTACATTCACTAGTGTTGCTCCTGCTGCTTGGAGTGGTGGTTCTGTCCACTCCAGTGTTGGCCAATTTCAATCCTTCATCTGTGAAACCACTCACCAAGACTCCCTCGATACTCCCCCCACGTCGTCCACCACCACCATTTCATAA 1686 0.4235 MEINGEGVSPHSISSIKFKVPEKQPYRTWYHFQPPKNWMNDPNAPMYYKGVYHFFYQHNPYAATFGEKMVWAHSVSYDLINWIHLNHAIEPSEPCDINSCWSGSATILPGEEEQPVILYTGIDNNKHQVQNIVKPKDLSDPFLREWVKHPQNPVMTPPSGVEVNNFRDPSTAWQGKDGKWRVVIGAQNGDEGKAVLYQSEDFVNWTVELNPFFATDNTGVCECPDFFPVSINGANGVDTSVQSQSVRHVLKISYLRRHVDYYFLGKYVYDEGNFIPDVKFTGTSSDLRLDYGKFYASKSFFDHAKNRRILWGWVNECDTRENDIEKGWAGLQCIPRQVWLDESGKRLMQWPIEEVEKLRGKQVSIMGEKLVGGSTIEVSGITASQADVEVLFELPELENAEWLDESEVDPHLLCSEEYASRSGIIGPFGLLALASEDQTEHSAVFFRIYRAPNRYVCFMCSDQSRSSLRQDLDKTTYGTIFDIDPNLKTISLRSLFPIATTFLHHNHKLKHDFFTFTSVAPAAWSGGSVHSSVGQFQSFICETTHQDSLDTPPTSSTTTIS 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00440 561 Gene3D - 364 498 - -
Pumo9g00440 561 Gene3D Glycosyl hydrolase domain; family 43 35 363 IPR023296 -
Pumo9g00440 561 SUPERFAMILY Concanavalin A-like lectins/glucanases 351 495 IPR013320 -
Pumo9g00440 561 SUPERFAMILY Arabinanase/levansucrase/invertase 23 352 IPR023296 -
Pumo9g00440 561 ProSitePatterns Glycosyl hydrolases family 32 active site. 31 44 IPR018053 GO:0004553|GO:0005975
Pumo9g00440 561 SMART glyco_32 31 496 IPR001362 GO:0004553|GO:0005975
Pumo9g00440 561 CDD GH32_Fruct1-like 37 340 - -
Pumo9g00440 561 Pfam Glycosyl hydrolases family 32 N-terminal domain 31 351 IPR013148 -
Pumo9g00440 561 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 21 496 - -
Pumo9g00440 561 Pfam Glycosyl hydrolases family 32 C terminal 354 478 IPR013189 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00440 Pumo-Chr9 6898193 6901125 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00440 36 496 Glycoside Hydrolase AT1G55120 53.715 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00440 - K01193 gmx:100806220 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00440 9 6898193 6901125 Pumo9g00440 9 6898193 6901125 ECH