Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00438 ATGGAGATCAATGCATCCCCCCACAGCATTAATTCGGTCAAGTACAAGGTACATGAAAAACAGCCTTACCGAACTTGGTACCACTTTCAGCCCCCACAAAATTGGATGAATGATCCAAATGGACCAGTGTACTACAAAGGAGTTTACCACTTTTTCTACCAACATAACCCTTATGCGCCAACCTTTGGAAGGCATATGGTATGGGGTCATTCCGTATCCTATGATCTCATAAATTGGATTCATCTAAATCATGCTGTTGAACCAAGTGAGTCCTATGACATTAATGGTTGCTATTCTGGCTCAATCACAACCCTCCCTGGGGAAAAACCTGTTATTATGTATACAGGGAGTGATACTAATAGACATCAAATTCAGAACTTGGCTATGCCAGAGAATCTATCAGACCCCTTCTTAAGGGAATGGGTGAAAAACCCCCAAAATCCTATAATGATTCCACCTAGTGGAATCGAAGTGGAGGGTTTCAGAGACCCAACAACTGCTTGGCATGGAAGTGATGGCAAATGGAGAGTAGTTATTGGTGCCAAAAATGGTGAAGATGGGAAGGCTCTTCTTTACCATAGTGAGGATTTTGTTAATTGGAAACTACATCCAAATCCTTTGTATGCATCAGACAATACTGGAATGTTTGAGTGTCCAGATTTTTTTCCAGTGTACATCAGTGGCTCAAAGAGTGGGGTGGATACATCTGTCCAAAACAGCAGTGTTAAGCATGTCTTGAAAATGAGTTATCAAAACAAACAGCAAGAGTACTATTTTCTTGGTGAATATTTTTCTGATCAGGAAAAGTTTATTCCTGATGCTGATTTGGGTGGAACTAGTTTGGATTTAATATTGGACCATGGAATGTTTTATGCTTCCAAGTCATTTTTTGACTCTGCCAAAAACAGAAGGGTATTGTGGGGATGGTCAAAGGAGTGTGACACCACACAAGATGATCATGAGAAAGGATGGGCTGGTCTACAGAGTATTCCAAGGCAAATTTGGCTTGATAGAAGTGGGAAGTGGTTGATGCAGTGGCCAATTGAAGAGGTAGAGAAACTACGTGACAATCAAATTAGCATAATGGGAGAGAAACTGGTTGGTGGATCAACTCTTGAAGTCTCAGGTATCACTGCATCACAGGCCGACATAGAAGTGTTGTTTGAGCTACCAGAACTAGAGAATGCAGAGTGGCTAGATGAAAGTGAAGTTGATCCCCACTTACTGTGCAGTGAAGAATATGCATCAAGAAGTGGCATAATAGGGCCATTTGGTTTGTTAGCTTTAGCATCTGAGGACCAAACAGAACACACTTCAATTTTCTTCAGAATATATAGAGCTCCCAATAGATATTTATGCCTCATGTGCAGTGACCAAAGCAGGTCTTCAATGCGGCAGGACCTTGATAAAACCACATATGGAACCATCTTTGACATTGATCCCAATCTCAAAACGATTTCACTTAGAAGCTTGATTGACCGTTCCATTATTGAGAGTTTTGGTGAGAAAGGGAGAATTTGTATTACCAGTAGAGTTTATCCCTCGTTGGCTATTGACAAAGATGCTCATCTTTATGTATTCAACAATGGAAGCCAGAGTGTGGTGATCTCTGAACTGAATGCTTGGAGCATGAAGCAAGCAGAATTTGGCCAAGAGGAAAGCATAAATAAGCTATAG 1677 0.4097 MEINASPHSINSVKYKVHEKQPYRTWYHFQPPQNWMNDPNGPVYYKGVYHFFYQHNPYAPTFGRHMVWGHSVSYDLINWIHLNHAVEPSESYDINGCYSGSITTLPGEKPVIMYTGSDTNRHQIQNLAMPENLSDPFLREWVKNPQNPIMIPPSGIEVEGFRDPTTAWHGSDGKWRVVIGAKNGEDGKALLYHSEDFVNWKLHPNPLYASDNTGMFECPDFFPVYISGSKSGVDTSVQNSSVKHVLKMSYQNKQQEYYFLGEYFSDQEKFIPDADLGGTSLDLILDHGMFYASKSFFDSAKNRRVLWGWSKECDTTQDDHEKGWAGLQSIPRQIWLDRSGKWLMQWPIEEVEKLRDNQISIMGEKLVGGSTLEVSGITASQADIEVLFELPELENAEWLDESEVDPHLLCSEEYASRSGIIGPFGLLALASEDQTEHTSIFFRIYRAPNRYLCLMCSDQSRSSMRQDLDKTTYGTIFDIDPNLKTISLRSLIDRSIIESFGEKGRICITSRVYPSLAIDKDAHLYVFNNGSQSVVISELNAWSMKQAEFGQEESINKL 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00438 558 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 359 544 - -
Pumo9g00438 558 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 17 548 - -
Pumo9g00438 558 SUPERFAMILY Concanavalin A-like lectins/glucanases 347 546 IPR013320 -
Pumo9g00438 558 SMART glyco_32 28 504 IPR001362 GO:0004553|GO:0005975
Pumo9g00438 558 CDD GH32_Fruct1-like 34 336 - -
Pumo9g00438 558 Pfam Glycosyl hydrolases family 32 N-terminal domain 28 347 IPR013148 -
Pumo9g00438 558 SUPERFAMILY Arabinanase/levansucrase/invertase 19 348 IPR023296 -
Pumo9g00438 558 Gene3D Glycosyl hydrolase domain; family 43 33 359 IPR023296 -
Pumo9g00438 558 Pfam Glycosyl hydrolases family 32 C terminal 350 543 IPR013189 -
Pumo9g00438 558 ProSitePatterns Glycosyl hydrolases family 32 active site. 28 41 IPR018053 GO:0004553|GO:0005975
Pumo9g00438 558 Gene3D - 360 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00438 Pumo-Chr9 6887419 6890239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00438 43 549 Glycoside Hydrolase AT5G11920 55.166 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00438 - K01193 gmx:100806753 1074.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00438 9 6887419 6890239 Pumo9g00438 9 6887419 6890239 ECH