Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00428 ATGACTCCGCGCTGCACTCTTCCACCACCCCCATGTTGCTCTACTCTTCCTCCAGGTGCATCTCCTCTGTTTCTTCCCCTGTTCTGCGAAACAGGGGAACCAAAACAGAGAAACCTTCTGGGGAGGAACATGAACATCACCAACATGTCACGCAGCATCGTTGGTGGTTTCCTCAGCGTTGGTTCAACTCGATCCATCTCGGTTGAAGCGCTTCAACCGAGTGACACTTTCCCACGGCGCCATAACTCTGCCACCCCAGAGGAACAGAGCAAGATGTCAGAGTCATGTGGATTTGAGAGCCTTGACTCCCTCGTTGACGCGACCGTGCCTAAATCGATTCGCCTGAAGGAGATGAAGTTCGGAAAATTCGATGGAGGGTTGACAGAGAGCCAGATGATAGAGCACATGAAGGACTTGGCCTCAAAGAACAAGGTTTTCAAGTCCTACATTGGGATGGGGTACTACAACACTCATGTTCCACCAGTGATCTTGAGGAACATAATGGAGAACCCTGCCTGGTACACTCAGTACACACCTTACCAGGCTGAGATATCTCAGGGGAGGCTTGAGTCACTGCTGAATTACCAGACCATGATCACTGACCTCACTGGCTTGCCTATGTCCAATGCTTCATTGCTTGATGAGGGCACTGCTGCAGCTGAGGCAATGTCCATGTGCAACAACATTCAGAAAGGGAAGAAGAAGACCTTCATCATTGCAAGCAACTGCCACCCTCAGACCATTGACATTTGCAAGACAAGGGCTGATGGTTTTGATCTCAAGGTTGTGACAGCAGATCTTAAGGATATTGATTACAAGTCTGGGGATGTTTGTGGGGTGCTTGTGCAGTACCCTGGCACTGAGGGAGAGGTTTTGGACTATGGGGAGTTTGTCAAGAAGGCTCATGCTCATGAGGTGAAGGTTGTTATGGCAAGTGATTTGTTGGCACTGACTGTGTTGAAGCCTCCTGGTGAGTTTGGGGCAGATATTGTTGTTGGCTCAGCTCAGAGGTTTGGGGTGCCAATGGGGTATGGAGGCCCTCATGCAGCTTTCTTGGCCACTTCACAAGAGTACAAGAGGATGATGCCTGGAAGAATCATTGGGGTTAGTGTTGATTCTTCTGGAAAGACTGCTTTGAGGATGGCAATGCAAACTAGGGAGCAGCATATCAGGAGGGACAAGGCTACCAGCAACATTTGCACTGCTCAGGCACTGCTTGCAAACATGGCTGCCATGTATGCTGTGTATCATGGACCTGAAGGCCTTAAGAACATTGCACACCGTGTTCATGGTCTTGCTGGGGCATTTGCTCTTGGATTAAAGAAACTTGGAACGGTGGAAGTTCAGGACCTTCCATTCTTTGACACTGTGAAGGTTAAGACTTCCAATGCGCATGCAATTGCTGATGCTGCTCTCAAAAGTGAAATAAATTTGCGGGTTGTGGATGGAAACACTATCACTGTTGCTTTTGATGAAACAACCACATTAGAGGATGTTGATAAGCTTTTCAAAGTTTTTGCTGGTGGAAAGCCGGTCTCCTTCACAGCTGCATCTCTTGCTCCAGAAGTTCAGAGTGCGATTCCTTCTGGATTAGCTAGGAAGAGCCCTTATCTGACACACCCTATCTTTAACACGTACCAAACTGAGCATGAGTTGCTTAGGTACTTGTATAGGCTACAATCAAAAGATCTCTCACTATGCCACAGTATGATCCCACTGGGATCTTGTACAATGAAGCTGAATGCAACAACTGAAATGATGCCTGTGACATGGCCCAGCTTTACTGATATTCACCCTTTTGCACCAATTGACCAGGCTCAAGGTTATCAGGAAATGTTCGACAATTTGGGTGAACTGTTGTGTACCATCACCGGGTTTGACTCCTTCTCTTTGCAACCAAATGCTGGTGCTGCTGGAGAATATGCTGGACTTATGGTTATTCGTGCATATCATTTGGCAAGAGGAGACCACCACCGCAATGTTTGCATTATACCTGTCTCAGCTCATGGTACAAATCCTGCTAGTGCTGCTATGTGTGGAATGAAAATTGTCTCTGTTGGAACTGATGCCAAGGGAAACATTAACATAGAAGAGTTGAGGAAGGCTGCTGAAACACACAAGGACAACTTATCTGCACTTATGGTAACATATCCTTCAACCCACGGTGTTTATGAGGAAGGTATTGATGAGATTTGCAAGATTATTCATGATAATGGAGGCCAAGTATACATGGATGGTGCCAACATGAATGCACAGGTGGGACTCACAAGCCCAGGTTGGATTGGAGCAGATGTTTGCCATCTCAATCTCCACAAGACATTTTGCATTCCTCATGGAGGAGGTGGCCCTGGCATGGGTCCTATTGGTGTAAAGAAACACTTGGCACCATTTTTACCTTCACACCCTGTGATAGCAACTGGTGGAATTCCTGCCCCTGACAAACCTCAACCACTTGGTACCATCTCTGCTGCACCATGGGGCTCAGCACTCATATTGCCAATCTCCTACACTTACATAGCCATGATGGGTTCTAAAGGACTCACTGATGCATCAAAGATAGCCATCTTGAATGCAAACTACATGGCAAAACGATTGGAGAATTATTATCCGGTTCTTTTCCGCGGAGTTAATGGAACAGTTGCTCATGAATTCATCATTGACTTGAGAGGCTTTAAGAATACTGCTGGAATTGAACCTGAAGATGTTGCAAAGCGCCTCATGGACTACGGTTTTCATGCACCAACAATGTCATGGCCTGTGCCTGGCACACTCATGATTGAGCCTACTGAGAGTGAAAGCAAGGTATGGCCTTCTTGGAAAATTAGTCCTTATGATGATGCCCTTTTTTCTTTGTAA 2856 0.4667 MTPRCTLPPPPCCSTLPPGASPLFLPLFCETGEPKQRNLLGRNMNITNMSRSIVGGFLSVGSTRSISVEALQPSDTFPRRHNSATPEEQSKMSESCGFESLDSLVDATVPKSIRLKEMKFGKFDGGLTESQMIEHMKDLASKNKVFKSYIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMSMCNNIQKGKKKTFIIASNCHPQTIDICKTRADGFDLKVVTADLKDIDYKSGDVCGVLVQYPGTEGEVLDYGEFVKKAHAHEVKVVMASDLLALTVLKPPGEFGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKTALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKNIAHRVHGLAGAFALGLKKLGTVEVQDLPFFDTVKVKTSNAHAIADAALKSEINLRVVDGNTITVAFDETTTLEDVDKLFKVFAGGKPVSFTAASLAPEVQSAIPSGLARKSPYLTHPIFNTYQTEHELLRYLYRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTDIHPFAPIDQAQGYQEMFDNLGELLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHLARGDHHRNVCIIPVSAHGTNPASAAMCGMKIVSVGTDAKGNINIEELRKAAETHKDNLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVIATGGIPAPDKPQPLGTISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILNANYMAKRLENYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKVWPSWKISPYDDALFSL 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00428 951 Coils Coil 696 716 - -
Pumo9g00428 951 FunFam glycine dehydrogenase (Decarboxylating), mitochondrial 588 827 - -
Pumo9g00428 951 MobiDBLite consensus disorder prediction 74 93 - -
Pumo9g00428 951 Gene3D Aspartate Aminotransferase, domain 1 149 502 IPR015422 GO:0003824
Pumo9g00428 951 Pfam Glycine cleavage system P-protein 523 799 IPR020581 GO:0004375|GO:0006546
Pumo9g00428 951 Pfam Glycine cleavage system P-protein 80 506 IPR020581 GO:0004375|GO:0006546
Pumo9g00428 951 CDD GDC-P 549 934 IPR020581 GO:0004375|GO:0006546
Pumo9g00428 951 Gene3D Aspartate Aminotransferase, domain 1 836 935 IPR015422 GO:0003824
Pumo9g00428 951 Gene3D - 160 420 IPR015421 GO:0003824
Pumo9g00428 951 Gene3D - 588 817 IPR015421 GO:0003824
Pumo9g00428 951 NCBIfam aminomethyl-transferring glycine dehydrogenase 80 935 IPR003437 GO:0004375|GO:0006544
Pumo9g00428 951 SUPERFAMILY PLP-dependent transferases 80 506 IPR015424 -
Pumo9g00428 951 FunFam Glycine cleavage system P protein 413 502 - -
Pumo9g00428 951 SUPERFAMILY PLP-dependent transferases 530 933 IPR015424 -
Pumo9g00428 951 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 63 934 IPR020581 GO:0004375|GO:0006546
Pumo9g00428 951 CDD GDC-P 129 506 IPR020581 GO:0004375|GO:0006546
Pumo9g00428 951 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 160 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00428 Pumo-Chr9 6721774 6727029 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00428 K00281 - gmx:100819714 1739.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00428 9 6721774 6727029 Pumo10g00262 10 3547566 3548689 PCT