Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00419 ATGTCGTCTTCTTCCGCGAACGACGCCGAGGCTCTCAGGCGCAACCGCATCCTCTCCAGCAAGCTCTACTTCGACGTGTCTCATTCCAAGGTTCCGCTAATCTACTCCGAGTCTTACGACATAGCGTTTCTCGGCATAGAGAAACTGCATCCGTTTGATTCGTCGAAGTGGGGACGCATTTGTCGATTCCTCGTTTCGTTTGGTATTCTCGACAAAAAATGCATCGTTGAGCCTTTGGAAGCTTCCAAGGATGATCTTCTAGTGGTACACTCAGAATGGTATTTGAATAGCCTGAAGGAGAGTTCAAAAGTTGCTATGATAGTTGAGGTCCCTCCTGTGGCATTAATTCCCAATTGTCTTGTGCAACAAAAAGTTCTTTTCCCATTCAGGAAGCAGGTTGGAGGAACTATATTGGCTGCGAAACTTGCAAAGGAGAGAGGATGGGCCATTAATGTGGGAGGTGGTTTTCATCACTGCTCTGCACAAAAAGGGGGTGGATTCTGTGCTTACGCAGATATTTCTCTATGCATCCACTTTGCTTTTGTTCGGTTGAATATATCAAGGGTGATGATCATTGATCTTGATGCACATCAAGGAAACGGTCATGAAATGGACTTCGCTTATGATAGCCGAGTCTATATCCTGGATATGTACAATCCTGGAATATATCCTTTGGATTATGAGGCAAGAAACTACATAAATCAGAAAGTTGAAGTAAAGAGTGGGACAGTTACAGAAGAGTACCTGCAAAAATTAGATGAAGCACTTGAGGTTGCTGGGCGTAGGTTTAACCCTGAGTTGGTAATTTATAATGCTGGAACTGACATCCTAGAAGGTGATCCATTAGGAAGGTTGGAGATCAGTCCTGAAGGAATTGCCCTTAGAGATGAGAAAGTTTTCCGGTTTGCTCGTGAGAAGAACATTCCTATCGTCATGCTCACTTCAGGTTTGCTATTGTTTTCCTTCTATCATATGGTGGCTACTATGGCCTGGTCTCTTGTGTGCATAGGAAACTTACCTAACAAAGACCTCAAGTCTTATATTACAATCTGTAGTCATATATTGTCCTTTTTTTTTATCTGTAGTTTGTGCATTTCACTTTACTTTTGTAAGCATCGTATCTTACTATGTTAA 1134 0.4242 MSSSSANDAEALRRNRILSSKLYFDVSHSKVPLIYSESYDIAFLGIEKLHPFDSSKWGRICRFLVSFGILDKKCIVEPLEASKDDLLVVHSEWYLNSLKESSKVAMIVEVPPVALIPNCLVQQKVLFPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAQKGGGFCAYADISLCIHFAFVRLNISRVMIIDLDAHQGNGHEMDFAYDSRVYILDMYNPGIYPLDYEARNYINQKVEVKSGTVTEEYLQKLDEALEVAGRRFNPELVIYNAGTDILEGDPLGRLEISPEGIALRDEKVFRFAREKNIPIVMLTSGLLLFSFYHMVATMAWSLVCIGNLPNKDLKSYITICSHILSFFFICSLCISLYFCKHRILLC 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00419 377 PRINTS Histone deacetylase superfamily signature 188 203 IPR000286 -
Pumo9g00419 377 PRINTS Histone deacetylase superfamily signature 265 275 IPR000286 -
Pumo9g00419 377 PRINTS Histone deacetylase superfamily signature 154 177 IPR000286 -
Pumo9g00419 377 CDD HDAC_classIV 50 316 IPR044150 GO:0004407|GO:0016575
Pumo9g00419 377 Gene3D Histone deacetylase domain 30 353 IPR037138 -
Pumo9g00419 377 PANTHER HISTONE DEACETYLASE 2-RELATED 34 333 - -
Pumo9g00419 377 Pfam Histone deacetylase domain 50 316 IPR023801 -
Pumo9g00419 377 SUPERFAMILY Arginase/deacetylase 28 316 IPR023696 -
Pumo9g00419 377 FunFam Histone deacetylase 11 31 337 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00419 K11418 - gmx:100781276 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00419 9 6625296 6631169 Pumo9g00419 9 6625296 6631169 ECH