Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02628 ATGTCGATAATGGGCATCCAGGGGCAACCTCTTGAGGTTACGGTGGTGTCGTGCTCCAAGTTGAAGGACACAGAATGGATTTCAAGGCAAGATCCGTACGTTTGTGTTGAGTATGGCAGCACAAAGTTCCGAACCAGAACCTGCACAGACGGCGGAAAAAATCCGGTATTCCAAGAGAAGTTCATCTTTCCCCTCATTGAAGGCCTTCGGGAGCTCAATGTCCTTGTTTGGAACAGCAATACTCTCACCTTCGACGATTTTATAGGAAGCGGAAAGATTCAATTGCACAAGGTTCTCTCTCAAGGTTTCGATGACTCTGCTTGGCCACTTCAGACCAAAACTGGCAGATACGCTGGTGAAGTAAAAGTCATATTGCATTATGCAATTGCATATCAAAGGCAGAAATCAGTCTCAAGCCATGCTCCATCAGCACCTCCGTATGTGCCAACAGCAATTCCCCCGGTCCCTTCTTCATATTCTATGCCCCCTGCTACTTCCTATCCTTCTGTTACTTCCTATCCTTCTGCTACTTCCTATCCTTCTGCTGCTTCATACCCACCACCTCCTTCTGCTACTTCCTACCCACCACCTCCCTCTGCAACTCCTTACCATACAACTGGATCTTACCCACCGCCACCCACAGTTTCATACCCACCATCTCCCACAGCTTACCCTCCCTATTCCTCACATCCACAGCCCTCATACCCTGCATCATCTCCCTATCCACCCCCATCATATCCCCCTGCTTCAGCTTATCCACCACCTCCATATCCACCACCTGCAGGTTATCCTCCTGGAATATACCCTCCACCGCCATACTGA 822 0.4927 MSIMGIQGQPLEVTVVSCSKLKDTEWISRQDPYVCVEYGSTKFRTRTCTDGGKNPVFQEKFIFPLIEGLRELNVLVWNSNTLTFDDFIGSGKIQLHKVLSQGFDDSAWPLQTKTGRYAGEVKVILHYAIAYQRQKSVSSHAPSAPPYVPTAIPPVPSSYSMPPATSYPSVTSYPSATSYPSAASYPPPPSATSYPPPPSATPYHTTGSYPPPPTVSYPPSPTAYPPYSSHPQPSYPASSPYPPPSYPPASAYPPPPYPPPAGYPPGIYPPPPY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02628 273 CDD C2 11 108 - -
Pumo8g02628 273 SMART C2_3c 10 107 IPR000008 -
Pumo8g02628 273 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 9 127 IPR035892 -
Pumo8g02628 273 PANTHER CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790) 4 273 - -
Pumo8g02628 273 Gene3D C2 domain 9 128 IPR035892 -
Pumo8g02628 273 Pfam C2 domain 11 101 IPR000008 -
Pumo8g02628 273 MobiDBLite consensus disorder prediction 181 243 - -
Pumo8g02628 273 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02628 Pumo-Chr8 63447276 63449424 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02628 - - gmx:100776879 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02628 8 63447276 63449424 Pumo8g02628 8 63447276 63449424 ECH