Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02625 ATGGCGGCACGGGCACGGGCACGGGCACAATCGATGTTGAGAGCGTTGAGGAGTGGTGAGCGTCAGTTGTCGGTGACAGTGACAAGGCAGTGGGAGGACAAATGGCTTACTCTGCCTCCCGTGAGTGTGAGTGTGGAGGTGAAGGGGAAAGAAGAGGGAAAGGGAAAGGGGAATCAACTGTCCTCCACTCCGACCACTGCGCTCAAATGGGTTGTTCGGTGCTGCCCCCACCTGCCCAGAGCCCTCGTGCACAAGCTTTTCCGTCTAAGACAGGTTCGAATTGCCATACAAGATCAAACATTCAAAAGGGTGGCAGCTAAGGACACCTTGAACACAGGAGATCGGATCTTACTTCCTCAATCTGTTAAAGTTAAACAAACGGCGTCGTCTACTACACACTCTCATCTCACTCCCCAACAAATCAACTTTATCCGTACTCTTGTTATCTATAAGGATCCTGCTATTCTCGTCCTCAACAAACCTCCAGGAATGCCAGTCCAGGGTGGCATTAATATCAAACGGAGTTTAGATGAAGTAGCTGCTGCATGTTTAAATTATGAATACTCTGAACCCCCTCGTCTGGTGCATAGACTAGACAGAGACTGTTCTGGCATTCTGGTGATGGGAAGGACACAGACAAGTACTACAGTCCTGCATTCCATCTTCCGGGAGAAAACTTCCAGGGCGTTAGATGATATTGACAAAGAGAAGAGAATACTACAAAGAAGGTACTGGGCACTGGTCCTTGGATGTCCTAGACGTCCAAAGGGGTTGGTCACTGCTTCACTGGGTAAGGTGGTGGTTGACAATGGGAGATCTGATCGAATAACTATCGTTAACAATTCTACATTAATGTCATCACAGCATGCAATTACGGAGTACCAAGTGATTGCATCATCATCACAAGGTTACACATGGTTGGAGCTGTCCCCTTTAACTGGCAGAAAACACCAGCTTCGAGTCCACTGTGCTGAGGTGTTAGGTACACCAATAGTTGGGGACTACAAGTATGGATGGCAAGCTCACAGGAAGTGGGGACATTTTGATTTGCCTAATGCGGAGGACTCACGTGAAGAGCTTCTCAGTGAAGAAACACTCCCCTTTGGCATTAATTTGAACAAAGGGAGCATCTCTGAGAATCATCCTCGTTTACATCTTCATTGCAAGCAAATAGTCTTGCCCAATATATCTCAAGCACTGCAAAATGTGCAATCAGCTTCTAATTGTGATCTTTCACTAGTGGAAAGGCTTGAGTTGGTGGCGGATTTGCCTCCATACATGCAAAGAAGTTGGGATGTCACAAATTATTGA 1311 0.4699 MAARARARAQSMLRALRSGERQLSVTVTRQWEDKWLTLPPVSVSVEVKGKEEGKGKGNQLSSTPTTALKWVVRCCPHLPRALVHKLFRLRQVRIAIQDQTFKRVAAKDTLNTGDRILLPQSVKVKQTASSTTHSHLTPQQINFIRTLVIYKDPAILVLNKPPGMPVQGGINIKRSLDEVAAACLNYEYSEPPRLVHRLDRDCSGILVMGRTQTSTTVLHSIFREKTSRALDDIDKEKRILQRRYWALVLGCPRRPKGLVTASLGKVVVDNGRSDRITIVNNSTLMSSQHAITEYQVIASSSQGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWGHFDLPNAEDSREELLSEETLPFGINLNKGSISENHPRLHLHCKQIVLPNISQALQNVQSASNCDLSLVERLELVADLPPYMQRSWDVTNY 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02625 436 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 62 433 - -
Pumo8g02625 436 SUPERFAMILY Pseudouridine synthase 143 395 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Pumo8g02625 436 CDD PseudoU_synth_RluA_like 155 346 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Pumo8g02625 436 Pfam RNA pseudouridylate synthase 155 324 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Pumo8g02625 436 Coils Coil 223 243 - -
Pumo8g02625 436 Gene3D Pseudouridine synthase 139 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02625 Pumo-Chr8 63415051 63418522 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02625 - - gmx:100779473 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02625 8 63415051 63418522 Pumo8g02625 8 63415051 63418522 ECH