Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02610 ATGAGTGATCAGGAAGTTTTAGGTTTAGGTTTATCGGAAGAAGATTACGACCTAATGTATGGTTCTGAATCGGGATGGGTGGATGTTCGAAGTTGGTGCGACCACCTAGGGTCCTTATCGAGCGATCTGAGGCACATTCCGGGCCCTGATACTCCGTGCCATTGCTGCCAACACCCCACTGAAAACTGGTTGTGTCTCTCCTGCAAGCAGGTCCTCTGTAGCCGTTTTGTGAACAAGCACATGCTCCAACATTTTCGGGACACAAATCACATTCACACCATCGCCCTCAGTTTCAGTGATCTCTCCGTCTGGTGTTTCTCCTGCGACGCTTACTTGGATCCTCAACTCATTCCCCAACTGCGTCCCGTTCATCAACTCGCCTATATATTGAAATTCGGTCAGCCTCCACCACTCCCACCAAATCAACATCAACCTTCATCTGCAACTTGA 450 0.4911 MSDQEVLGLGLSEEDYDLMYGSESGWVDVRSWCDHLGSLSSDLRHIPGPDTPCHCCQHPTENWLCLSCKQVLCSRFVNKHMLQHFRDTNHIHTIALSFSDLSVWCFSCDAYLDPQLIPQLRPVHQLAYILKFGQPPPLPPNQHQPSSAT 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02610 149 ProSiteProfiles Zinc finger UBP-type profile. 31 134 IPR001607 GO:0008270
Pumo8g02610 149 Pfam Zn-finger in ubiquitin-hydrolases and other protein 53 114 IPR001607 GO:0008270
Pumo8g02610 149 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 27 135 IPR013083 -
Pumo8g02610 149 SUPERFAMILY RING/U-box 31 123 - -
Pumo8g02610 149 PANTHER HISTONE DEACETYLASE-LIKE PROTEIN 13 141 - -
Pumo8g02610 149 SMART Zf_UBP_1 52 103 IPR001607 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02610 Pumo-Chr8 63299844 63300293 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02610 - - aprc:113869857 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02610 8 63299844 63300293 Pumo8g02610 8 63299844 63300293 ECH