Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02605 ATGGGAATCCGATCGGTGTTTGATGGCGGCGAGCTGAGAAGGGAGTTTTCGAAAAATGGAATTGACCCTAAATTCATTCCAATCATATGGAAGCATCTCGTTATTGCGAATGCGAAGAAAGAAGAAAAGGAAGATTGGGATTGGGATTGGGATTGGGAGAAACAAGTTCCTTCGTTGCCTTGTTCAGCATACTCTCTCCTTCGTTCCAACTTCAAAACCACCCCTCTCTCTTCCTCTCTCCACTCCGTTTTCCACTCTGCCGATAATGTCACCTCGAAGCTCCTCATAAAGCTCCATAATGGAGCATTCGTGGAGGCCGTCATAATGAGGTACGATACTCGTTTGGGGAAATATGCTGGCCAACCCCGTCCCGGTGGTCTAAGAGCAACATTGTGTATTTCATCTCAGGTAGGATGCAAAATGGGTTGCAAATTCTGTGCCACTGGATCCATGGGATTCAAAAACAACCTATCATCCGGAGAAATTGTGGAACAGCTCCTTCATGCCTCTACTTTCTCACAAATCCGTAACGTTGTCTTCATGGGAATGGGAGAGCCTCTCAACAACTATTCTGCTGTGGTAGAAGCCGTTCGCATCATGACTGGATTGCCATTCCAATTGTCCTTGAAAAGGATTACCATCTCAACGGTTGGCATCATTCATGCTATCAACAAGCTTCATAATGACCTGCCTGGTTTGAACTTGGCAGTCTCACTGCATGCACCAGCCCAAGACATCCGTTGCCAGATAATGCCTGCCGCTCGTGCTTTCCCTTTGGAAAAACTTATGGATTCACTGCAACAATATCAAAGGAAAAGGTACCTCATTATTGAGCATCAGTAG 843 0.4591 MGIRSVFDGGELRREFSKNGIDPKFIPIIWKHLVIANAKKEEKEDWDWDWDWEKQVPSLPCSAYSLLRSNFKTTPLSSSLHSVFHSADNVTSKLLIKLHNGAFVEAVIMRYDTRLGKYAGQPRPGGLRATLCISSQVGCKMGCKFCATGSMGFKNNLSSGEIVEQLLHASTFSQIRNVVFMGMGEPLNNYSAVVEAVRIMTGLPFQLSLKRITISTVGIIHAINKLHNDLPGLNLAVSLHAPAQDIRCQIMPAARAFPLEKLMDSLQQYQRKRYLIIEHQ 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02605 280 ProSiteProfiles Radical SAM core domain profile. 125 280 IPR007197 GO:0003824|GO:0051536
Pumo8g02605 280 Gene3D Aldolase class I 79 279 IPR013785 -
Pumo8g02605 280 Pfam 4Fe-4S single cluster domain 138 223 - -
Pumo8g02605 280 Pfam Radical SAM superfamily 134 251 IPR007197 GO:0003824|GO:0051536
Pumo8g02605 280 SUPERFAMILY Radical SAM enzymes 130 263 - -
Pumo8g02605 280 CDD Radical_SAM 138 277 - -
Pumo8g02605 280 SFLD Radical SAM 134 247 IPR007197 GO:0003824|GO:0051536
Pumo8g02605 280 PANTHER 23S RRNA METHYLTRANSFERASE 7 278 IPR040072 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02605 Pumo-Chr8 63274243 63276479 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02605 - - gmx:100804869 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02605 8 63274243 63276479 Pumo8g02605 8 63274243 63276479 ECH