Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02415 ATGGGCAAGCCAGAGAGGCGCACGAACCTGGCGTCGTGTTTCGTGGCCACCATTTTCTTGCTCTTCCTTCTCATCGTGGTCTTCATCGTTTACTTCACGATGTTCAAGCCCCAGGACCCCAAAATCGCCGTCAGCGCCGTCCAGATCCCTTCCTTCTCCGCCACTAACGGCACCGTCAACTTCACCTTCTCCCAGTACTTCTCTGTTAGAAACCCTAACCGAGGCACCTTCTCCCACTACGACAGCTCGCTCCAGCTTCTCTACTACGGCAGACAGGTCGGCTTCATGTTCGTTCCCGCCGGCAAGATCGCCGCCGGCAGGACTCAGTACATGGCCGCCACGTTCACCGTCCAGTCCTTCCCCTTGGACCCGGGGCCCACCTTCGTGAATGGGCCCAGCAGTGTGAGGCCCACGATGGAGATCGAGTCGAGGATAGAGATGGCGGGGCGCGTGAGAGTGTTGCACCTTTTCAGTCACCACGTGGAGGCCAAAGCTCAATGCAGGGTCGCCATCACCATCACCGATGGATCCGTTTTAGGTTTTCGTTGCTAA 552 0.5779 MGKPERRTNLASCFVATIFLLFLLIVVFIVYFTMFKPQDPKIAVSAVQIPSFSATNGTVNFTFSQYFSVRNPNRGTFSHYDSSLQLLYYGRQVGFMFVPAGKIAAGRTQYMAATFTVQSFPLDPGPTFVNGPSSVRPTMEIESRIEMAGRVRVLHLFSHHVEAKAQCRVAITITDGSVLGFRC 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02415 183 Pfam Late embryogenesis abundant protein 67 167 IPR004864 -
Pumo8g02415 183 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 5 173 - -
Pumo8g02415 183 SUPERFAMILY LEA14-like 19 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02415 Pumo-Chr8 61378381 61379382 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02415 - - gmx:100820289 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02415 8 61378381 61379382 Pumo8g02415 8 61378381 61379382 ECH
Pumo8g02415 8 61378381 61379382 Pumo6g00403 6 5143216 5144087 PCT