Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02397 ATGGCACAGAAGAGATTCATCATCGAGGTTGAGAAAGCGAAGAAGGCGAGCGAAGGAAGGCCTTCGAGAGGCCCTGTGTATCGTAGCCTCTTCGCCAAGGATGGATTCCCTGCTCCCGTCGAACGTCTCGATAGTTGCTGGGACGTTTTTCGAATGTCTGTTGAGAAATATCCATCAAGTCCAATGCTTGGTCGCCGGGAAATTGTGGATGGGAAGCCAGGCAACTACAACTGGCTAACATACAAAGAAGTATATGACCAGGTGATAAAAGTTGGGAATTCCATCCGCAGCTGTGGTTATGGAGAAGGTGTAAAATGTGGTATTTATGGTGCCAATTCTGCAGAATGGATTATGAGCATGGAGGCTTGCAATGCTCATGGACTTTATTGTGTTCCTTTATATGATACCTTGGGTGCTGGGGCTGTAGAGTTTATTATATGCCATGCAGAGGTCTCAATCGCATTTGCAGAAGAAAAGAAGATACCTGAGCTATTGAGGACATTTCCAAATGCAACAAAGTATCTCAAGACAATTGTAAGCTTCGGAAAGGTTACCCTTGAACAAAAGCAAGAAGTTGAGAAGTTTGGGTTGGCAATATATTCATGGGATGAATTTTTACTAGTGGGTCAAAATCAGAGTTTTGATCTTCCTTTTAAGAAAAGGAGTGACATCTGTACAATAATGTATACTAGTGGAACGACTGGTGACCCCAAGGGAGTGTTGATATCAAATGAGAGTATTATTACTCTCTTAGCTGGGGTTAAGCGACTGTTGGAGAGTGTTAATGAAAAATTGACTGAGAAGGATGTATACATATCTTACCTTCCTCTCGCACATATCTTTGATAGGGTCATTGAGGAGACATTCATATGGCATGGTGCTTCAATAGGTTTCTGGCGTGGGGATGTCAAATTGTTAATTGAAGATATTGGAGAACTAAAACCAACTATTTTCTGTGCTGTTCCCCGAGTGCTTGAGAGAGTGTACTCAGGTTTGACACAGAAGATTTCTTCTGGGGGCTTCTTGAAGAAGACAATATTCAACTTTGCTTATTCATATAAGCTGAATAACATGAAGAAAGGGCTTACACATGGAGAGGCATCTCCACTTCTTGATAAAATTGTGTTTGATAAGGTAAAGCAAGGTTTAGGGGGTAGAGTACGTCTTATTTTGTCTGGAGCAGCTCCTTTATCTGCACATGTGGAAGGTTACTTGCGGGTGGTGACTTGTGCTCATGTCCTACAAGGATATGGTCTGACTGAAACCTGTGCGGGAACTTTTGTCTCATTACCAAATGAAATTGAAATGCTTGGAACAGTGGGCCCTCCTGTACCAAATGTGGATGTGTGCCTGGAATCTGTTCCTGAAATGGGATATGATGCCCTAGCAAGCACACCAAGAGGGGAAATTTGTGTAAAAGGAAAAACCTTGTTTTCAGGGTACTACAAACGTGAAGACCTCACCAAAGAGGTTCTTATTGATGAATGGTTCCATACAGGGGATATTGGAGAGTGGCAACCTAATGGAAGCATGAAAATTATTGATAGGAAGAAGAATATATTTAAACTTTCACAAGGAGAATATGTTGCTGTTGAAAACCTGGAGAATATTTACAGTCAAGTTTCTTCTATTGAATCTATATGGGTTTATGGAAACAGTTTTGAGGCCTTCCTCGTTGCTGTTGTTAACCCCAGTAAGCAAGCACTTGAACATTGGGCACAAGAAAATGGTATATCCATGGACTTCGAATCTCTCTGTGAAGATGCCCGAGCAAAAAGTCACATACTTGAAGAGCTCTCAAAGATTGGGAAGGAAAAGAAGTTGAAAGGTTTTGAGTTTATAAAAGCAGTTCACCTTGACCCAGTTCCATTTGACATGGAACGTGACCTTATCACTCCAACGTATAAGAAGAAGAGGCCACAGTTGCTTAAATACTATCAGAATGCCATTGACAACATGTACAAGAGTGGAAGTAAACCCAGCGCCTGA 1989 0.4163 MAQKRFIIEVEKAKKASEGRPSRGPVYRSLFAKDGFPAPVERLDSCWDVFRMSVEKYPSSPMLGRREIVDGKPGNYNWLTYKEVYDQVIKVGNSIRSCGYGEGVKCGIYGANSAEWIMSMEACNAHGLYCVPLYDTLGAGAVEFIICHAEVSIAFAEEKKIPELLRTFPNATKYLKTIVSFGKVTLEQKQEVEKFGLAIYSWDEFLLVGQNQSFDLPFKKRSDICTIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNEKLTEKDVYISYLPLAHIFDRVIEETFIWHGASIGFWRGDVKLLIEDIGELKPTIFCAVPRVLERVYSGLTQKISSGGFLKKTIFNFAYSYKLNNMKKGLTHGEASPLLDKIVFDKVKQGLGGRVRLILSGAAPLSAHVEGYLRVVTCAHVLQGYGLTETCAGTFVSLPNEIEMLGTVGPPVPNVDVCLESVPEMGYDALASTPRGEICVKGKTLFSGYYKREDLTKEVLIDEWFHTGDIGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIYSQVSSIESIWVYGNSFEAFLVAVVNPSKQALEHWAQENGISMDFESLCEDARAKSHILEELSKIGKEKKLKGFEFIKAVHLDPVPFDMERDLITPTYKKKRPQLLKYYQNAIDNMYKSGSKPSA 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02397 662 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 16 654 - -
Pumo8g02397 662 CDD LC-FACS_euk 74 655 IPR045311 GO:0004467|GO:0006631
Pumo8g02397 662 SUPERFAMILY Acetyl-CoA synthetase-like 42 655 - -
Pumo8g02397 662 Gene3D - 40 516 IPR042099 -
Pumo8g02397 662 Pfam AMP-binding enzyme 55 524 IPR000873 -
Pumo8g02397 662 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02397 Pumo-Chr8 61195134 61204521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02397 3 656 Acyl Lipid Metabolism Gene Families AT4G23850 75.688 0.0 1066
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02397 K01897 - gmx:100814965 1287.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02397 8 61195134 61204521 Pumo8g02397 8 61195134 61204521 ECH