Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02392 ATGGCGAAGGAGTTATTGACACTCGATGATGGCACAACCTGCACATCCTGGAACTATTCTGGAACGAGACTCGCTGCGGGTTCCGCCGATGGCACGCTTTCAATCTTCGATTCCCGCGATCCACCTTCTTCTTCTTCCCTCTGCTCTACTTTCAAATCTAGGGTTCTAGAAGGAAACATCTTGAAGATTGTTTGGATTCCGCCAGAGTATGGTGATGCAGTTGCCTGCATTTCTGCCGATGGAATTGTCTCATTGTGGGAGGAGGTCGCAGAAGATTCCCAGTCTCTTCAGTGGAAGATGTGCAAAAGCTTTGGAAACAGTTCAAGCAAAGTCCTTGATGTTCAATTTGGAATCTCTCTAACTAGTTTGAAAATGGTTGCTGCATATTCAGATGGTAATGTAAGAGTTTTTGAGCTCTTGGATCCCCTGGAACTGAGAAACTGGCAGCTTCAGGCTGAATTTCAAAATGTTATCGAGTCAGTGTCTTCATTTGGAAAGGCTTCATGCCTCTCTGCATCCATTTCATGGAATCCACAAAAAGGTGGAAGCCAGGAATCCAGCTTCCTTGTAGGCTTTAATTCAAATGCATCAGAGCTTAATTCTTCCAAGGTATGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCGGTGGCAGAACTGGCACTGCCTGAGGACAAGGGTGATCAGGTTTATGCTGTTGCATGGGCACCAAATATTGGCAGACCGTATGAGATCATTGTGGTTGCAACCCACAAGGGACTTGCAATATGGCATCTTGGATTGAACCCTGATCATGATGGAAGACTCCCAGTAGAGAGAGTTGCACTACTGTCAGGTCATGAGGGCATGGTGTGGCAAATGGAGTGGGATATGAGTGGAACGACTTTGGCTACTACAGGTCATGATGGAATGGTCCGATTATGGCAGTCCAATCTCAATGGCGTTTGGCATCAGCAAGCTGCATTTGAACCCACTTCTTAG 981 0.4628 MAKELLTLDDGTTCTSWNYSGTRLAAGSADGTLSIFDSRDPPSSSSLCSTFKSRVLEGNILKIVWIPPEYGDAVACISADGIVSLWEEVAEDSQSLQWKMCKSFGNSSSKVLDVQFGISLTSLKMVAAYSDGNVRVFELLDPLELRNWQLQAEFQNVIESVSSFGKASCLSASISWNPQKGGSQESSFLVGFNSNASELNSSKVWEFDQAHQRWLPVAELALPEDKGDQVYAVAWAPNIGRPYEIIVVATHKGLAIWHLGLNPDHDGRLPVERVALLSGHEGMVWQMEWDMSGTTLATTGHDGMVRLWQSNLNGVWHQQAAFEPTS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02392 326 ProSiteProfiles Trp-Asp (WD) repeats profile. 277 309 IPR001680 GO:0005515
Pumo8g02392 326 Gene3D - 9 323 IPR015943 GO:0005515
Pumo8g02392 326 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 277 309 - -
Pumo8g02392 326 Pfam WD domain, G-beta repeat 277 308 IPR001680 GO:0005515
Pumo8g02392 326 Pfam WD domain, G-beta repeat 13 37 IPR001680 GO:0005515
Pumo8g02392 326 PANTHER NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER 7 324 IPR037363 GO:0005198
Pumo8g02392 326 SMART WD40_4 44 87 IPR001680 GO:0005515
Pumo8g02392 326 SMART WD40_4 1 37 IPR001680 GO:0005515
Pumo8g02392 326 SMART WD40_4 270 309 IPR001680 GO:0005515
Pumo8g02392 326 SMART WD40_4 97 138 IPR001680 GO:0005515
Pumo8g02392 326 SUPERFAMILY WD40 repeat-like 8 311 IPR036322 GO:0005515
Pumo8g02392 326 FunFam Nucleoporin SEH1 9 324 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02392 K14299 - gmx:100780788 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02392 8 61110485 61113531 Pumo8g02392 8 61110485 61113531 ECH