Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02389 ATGTGGAGGCGCGCATATGCATATATAATAGTAACTTTTCGAAAGGGAACAAGAAAAATTTGGTTTCATTTGGATTCTGTTATTCCGTTTACTTTCCTTTCTCTAATTCTCTCATCTCATCTCATCTTTCAAGACCAAAGTCGATCTCTCGCAATGGCGTCCGAAGCAAAGCCTGCAGGTGATGGTGTGAAACCTCGAACTCACGAGCTTCTCAGCATCTGCAAGTCTCTCGTCGCCGGCGGAGTTGCCGGTGGAGTGTCACGAACTGCTGTAGCTCCTCTGGAGAGATTGAAGATTCTGCTGCAGGTTCAAAATCGTCAAAATATAAAATACAACGGAACAATTCAAGGCTTAAAATATATATGGAAAACTGAGGGTTTTAGAGGAATGTTTAAAGGAAACGGAACTAATTGTGCTCGTATTGTCCCAAATTCAGCAGTCAAGTTCTTTAGCTATGAGCAAGCTTCCAAGGGTATTTTATGGCTCTACCAGCAGCAACCTGGAAATGAAGAAGCTCAGCTCACTCCTATTCTGCGTCTTGGAGCTGGCGCATGCGCGGGAGTCATTGCCATGTCTGCCACTTATCCAATGGACATGGTGCGAGGAAGGCTAACCGTCCAGACAGAAGCATCTCCTCGTCAATACAGAGGAATTTTTCATGCTCTTTCAACAGTCTTCCGGGAAGAAGGCCCTCGAGCTTTGTATAAAGGCTGGCTACCTTCAGTCATAGGAGTTATACCGTATGTGGGTCTTAATTTTTCCGTATATGAATCTCTCAAAGACTGGTTGATTCAATCTAAACCATTTGGAATAGCTCAAGACTCTGAGCTAAGTGTGACCACAAGGCTTGCATGTGGGGCTGCTGCTGGAACTGTTGGCCAGACTGTGGCTTACCCCCTTGATGTCATTCGCCGAAGAATGCAAATGGTGGGATGGAAAGATGCTGCTTCAGTAGTTGCTGGTGAGGGGAAGAGCAAAATTGAGTATACTGGCATGGTTGATGCATTCAAGAAAACTGTGCAGCATGAAGGATTTGGAGCATTATACAAGGGCCTAGTTCCCAATTCAGTGAAGGTGGTCCCTTCTATAGCTATTGCTTTCGTGACATACGAGATGGTCAAGGACATTCTTGGTGTAGAAATGAGAATATCTGACTGA 1158 0.4482 MWRRAYAYIIVTFRKGTRKIWFHLDSVIPFTFLSLILSSHLIFQDQSRSLAMASEAKPAGDGVKPRTHELLSICKSLVAGGVAGGVSRTAVAPLERLKILLQVQNRQNIKYNGTIQGLKYIWKTEGFRGMFKGNGTNCARIVPNSAVKFFSYEQASKGILWLYQQQPGNEEAQLTPILRLGAGACAGVIAMSATYPMDMVRGRLTVQTEASPRQYRGIFHALSTVFREEGPRALYKGWLPSVIGVIPYVGLNFSVYESLKDWLIQSKPFGIAQDSELSVTTRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWKDAASVVAGEGKSKIEYTGMVDAFKKTVQHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMRISD 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02389 385 SUPERFAMILY Mitochondrial carrier 69 372 IPR023395 -
Pumo8g02389 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 71 158 IPR018108 -
Pumo8g02389 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 174 262 IPR018108 -
Pumo8g02389 385 PANTHER SOLUTE CARRIER FAMILY 25 67 379 - -
Pumo8g02389 385 Pfam Mitochondrial carrier protein 175 265 IPR018108 -
Pumo8g02389 385 Pfam Mitochondrial carrier protein 72 157 IPR018108 -
Pumo8g02389 385 Pfam Mitochondrial carrier protein 276 377 IPR018108 -
Pumo8g02389 385 Gene3D Mitochondrial carrier domain 67 379 IPR023395 -
Pumo8g02389 385 FunFam Mitochondrial substrate carrier 69 379 - -
Pumo8g02389 385 PRINTS Mitochondrial carrier protein signature 89 103 IPR002067 GO:0055085
Pumo8g02389 385 PRINTS Mitochondrial carrier protein signature 76 89 IPR002067 GO:0055085
Pumo8g02389 385 PRINTS Mitochondrial carrier protein signature 189 207 IPR002067 GO:0055085
Pumo8g02389 385 PRINTS Mitochondrial carrier protein signature 286 308 IPR002067 GO:0055085
Pumo8g02389 385 PRINTS Mitochondrial carrier protein signature 133 153 IPR002067 GO:0055085
Pumo8g02389 385 PRINTS Mitochondrial carrier protein signature 235 253 IPR002067 GO:0055085
Pumo8g02389 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 277 376 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02389 Pumo-Chr8 61088176 61092330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02389 77 380 EF-hand Containing Proteins AT5G51050 39.016 5.99e-67 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02389 K14684 - gmx:100784834 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02389 8 61088176 61092330 Pumo8g02389 8 61088176 61092330 ECH