Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02386 ATGTCTTCGTCGAAAGAGGCAGACCCAACCCTGGGTTACCTCACTCGCAAGGACACGGAAGTGAAGCTTCCGCGTCCAACCAGGGTGAAGAACAAGACCCCCGCTCCGATTCAAATCACCGCCGAGCAGATTCTCCGGGAGGCACGTGAGCGTCAAGAGGCTGAGATCCGCCCTCCCAAGCAGAAAATAACCGACTCCACCGAGCTCGGCGAGTACCGTCTCCGGAAGCGCAAGGAGTTCGAGGACCTAATCCGGCGCGTCCGGTGGAACATCGGCGTGTGGATCAAGTACGCGCAGTGGGAGGAATCGCAGAAGGACTTCAAACGCGCGCGTTCCGTTTGGGAGAGAGCGTTGGAGGTGGATTATAAGAACCACACCCTATGGCTCAAATACGCAGAGGTGGAGATGAAGAACAAGTTCATAAACCACGCAAGGAACGTTTGGGACCGCGCAGTGACGCTTTTGCCGAGGGTGGATCAGCTATGGTACAAGTACATTCACATGGAGGAGATGCTCGGCAATGTCGCCGGCGCCAGGCAGGTTTTCGAGCGCTGGATGAAGTGGACCCCGGACCAGCAGGGATGGCTCTCTTACATCAAGTTTGAATTGAGGTACAATGAAATTGAGCGCGCCAGAGGGATTTTCGAGCGATTTGTTGAGTGCCACCCTAGGGTTGGGGCTTGGATACGCTATGCCAAGTTTGAGATGAAGAATGGCGAGGTTGCGAGGGCGAGGAACGTGTACGAGAGGGCAGTGGATAAGCTCTCTGATGATGAGGAAGCAGAGCAGTTGTTTGTTGCTTTTGCTGAGTTTGAGGAAAGGTGTAAGGAGACTGAGCGTGCAAGAGCTATATATAAGTTTGCTCTTGATCATATTCCCAAGGGAAGGGCGGAAGATTTGTATCGCAAGTTTGTGGCGTTTGAGAAGCAGTATGGGGACAGGGAAGGGATTGAGGATGCTATTGTTGGGAAGAGAAGGTTTCAGTATGAGGATGAAGTGAAGAAGAATCCCTTGAATTACTGA 1023 0.5279 MSSSKEADPTLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELGEYRLRKRKEFEDLIRRVRWNIGVWIKYAQWEESQKDFKRARSVWERALEVDYKNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQVFERWMKWTPDQQGWLSYIKFELRYNEIERARGIFERFVECHPRVGAWIRYAKFEMKNGEVARARNVYERAVDKLSDDEEAEQLFVAFAEFEERCKETERARAIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVKKNPLNY 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02386 340 SMART hat_new_1 239 274 IPR003107 GO:0006396
Pumo8g02386 340 SMART hat_new_1 276 310 IPR003107 GO:0006396
Pumo8g02386 340 SMART hat_new_1 206 237 IPR003107 GO:0006396
Pumo8g02386 340 SMART hat_new_1 71 103 IPR003107 GO:0006396
Pumo8g02386 340 SMART hat_new_1 139 171 IPR003107 GO:0006396
Pumo8g02386 340 SMART hat_new_1 173 204 IPR003107 GO:0006396
Pumo8g02386 340 SMART hat_new_1 105 137 IPR003107 GO:0006396
Pumo8g02386 340 SUPERFAMILY TPR-like 194 263 IPR011990 GO:0005515
Pumo8g02386 340 MobiDBLite consensus disorder prediction 11 27 - -
Pumo8g02386 340 SUPERFAMILY TPR-like 263 329 IPR011990 GO:0005515
Pumo8g02386 340 SUPERFAMILY TPR-like 81 195 IPR011990 GO:0005515
Pumo8g02386 340 PANTHER PRE-MRNA SPLICING FACTOR 24 340 IPR045075 GO:0000398
Pumo8g02386 340 FunFam Cell cycle control protein 121 325 - -
Pumo8g02386 340 MobiDBLite consensus disorder prediction 1 35 - -
Pumo8g02386 340 Gene3D Tetratricopeptide repeat domain 122 339 IPR011990 GO:0005515
Pumo8g02386 340 Pfam HAT (Half-A-TPR) repeat 207 235 IPR003107 GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02386 K12869 - gmx:100791616 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02386 8 61077816 61078838 Pumo8g02386 8 61077816 61078838 ECH