Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02378 ATGACAGAATCCGACACGGATGATGTTGGTAAGAAGTGTAACTTCACGTTCGCGTTCAACAACATCAATTTCTCAGACCGAATTCTCAACATTGAGGTTATACCCGACCCTCATTTCATCCCCACCCAATCCCATTCTCTCGCTACCCTCTCTCCAAATCCCAAGAGACGCAGACACTCTCTTATCAAAGCCATTGATGTCCCCTTGCAACCCGAGGAAAAGGTAAATTGTAATTTACCAGATGCAGAGGAAGCTGTGGCAATCACTGTGGCTTCACCCTCAGGTGATGAAGTTTCCCATGGCAATGATTCATCATTGGGCATGAGTTGGTCAAAAGTTCTAAGAGTTAGGACCATGCATATAAGTTCTCCAATTCTTGCTGCAAAAAGCCCCGTCTTTTATAAATTGTTTTCAAATGTGACAAGTGAGTCTAAGCAACAAAATGTGACCCTTCAGATCCATGATTCTGAAGAGGCTGCCGTTATGGACCTACTTAATTTTATGTATAGTAATACTTTATCAAGAACGACACCTGCTGCTGTATTGGATGTGCTGATGGCTGCTGATAAATTTGAGGTTGCGTCATGCATAAGGTATTGCAGTAGGATGTTGAGGTTAATGTCTATGACTTGTGAGTCTGCCTTACTTTATTTGGATCTTCCTTCAAGCATTTTGACGTCAGATGCAATTCAACCACTGATAGAGACAGCAAAGTTGTTTCTTGCCACACACTACAGAGACATAACAAAGTTTGCAGATGAAGTGCTGAATTTGCCCTTGGCTGGCATTGAAGCTGTGCTATCTAGTGATGACCTCCAGATGCCTTCAGAGGATGCTGTCTATGAGTTTGTGCTCAAGTGGGCTAGGATACATTATCCAAAAATTGAGGACCGACAAGATGTCCTTGGAACACGCCTTGGTCAACTCATCCGTTTTCCATACATGAGCTGCCGAAAACTGAAGAAGGTCTTAACATGCAAAGACTTCCATCCTGACTTTGCATCAAAGGTTGTTCTTGAAGCTCTCTTCTACAAGGCAGAGACACCATATCGACAACGGTCTCTTGCTGCACAGGATGCTGGCACCACCTACTCTCGTTTTGTGGAGAGAGCTTACAAGCTCCGCCATGTGAAGGTGGTTGAATTTGCATTGCCCCGTTCGCGATGTGTCGTATACCTTGACCTAAAGAAAGAAGAATGTGCGCAATTTTTTCCTAATGCTCGAATTTACTCTCAGGCATTCCCCCTAGGGGAGCAGTGGTTTTTCTTGTCAGCTCGCTGCAATATGGACCAGCAAAACGAATCCCATTGCTTTGGGCTTTTCTTAGTAATGCAATTCAAGGAATCAGTATCTCTTCATGTTGACTATGAATTTGCTGCTAGATCAAAATCGACTGAGGAGTATCTAAGCAGGTGCAAGGGAGATTATACTTTCACAGCAGGCAAGGCTGTAGGGTATAGGAACCTTGTTTGGTATTCCATGGACTGCATTCATAGCTGA 1500 0.4373 MTESDTDDVGKKCNFTFAFNNINFSDRILNIEVIPDPHFIPTQSHSLATLSPNPKRRRHSLIKAIDVPLQPEEKVNCNLPDAEEAVAITVASPSGDEVSHGNDSSLGMSWSKVLRVRTMHISSPILAAKSPVFYKLFSNVTSESKQQNVTLQIHDSEEAAVMDLLNFMYSNTLSRTTPAAVLDVLMAADKFEVASCIRYCSRMLRLMSMTCESALLYLDLPSSILTSDAIQPLIETAKLFLATHYRDITKFADEVLNLPLAGIEAVLSSDDLQMPSEDAVYEFVLKWARIHYPKIEDRQDVLGTRLGQLIRFPYMSCRKLKKVLTCKDFHPDFASKVVLEALFYKAETPYRQRSLAAQDAGTTYSRFVERAYKLRHVKVVEFALPRSRCVVYLDLKKEECAQFFPNARIYSQAFPLGEQWFFLSARCNMDQQNESHCFGLFLVMQFKESVSLHVDYEFAARSKSTEEYLSRCKGDYTFTAGKAVGYRNLVWYSMDCIHS 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02378 499 ProSiteProfiles BTB domain profile. 102 177 IPR000210 GO:0005515
Pumo8g02378 499 Gene3D - 244 346 - -
Pumo8g02378 499 SMART BACK_2 223 325 IPR011705 -
Pumo8g02378 499 FunFam BTB/POZ domain-containing protein POB1 103 241 - -
Pumo8g02378 499 SMART BTB_4 84 208 IPR000210 GO:0005515
Pumo8g02378 499 Pfam BTB/POZ domain 118 204 IPR000210 GO:0005515
Pumo8g02378 499 SUPERFAMILY POZ domain 118 204 IPR011333 -
Pumo8g02378 499 Gene3D Potassium Channel Kv1.1; Chain A 111 243 IPR011333 -
Pumo8g02378 499 FunFam BTB/POZ domain-containing protein POB1 242 346 - -
Pumo8g02378 499 CDD BTB_POZ_ZBTB_KLHL-like 117 191 - -
Pumo8g02378 499 Pfam BTB And C-terminal Kelch 232 323 IPR011705 -
Pumo8g02378 499 PANTHER OS02G0260700 PROTEIN 6 490 IPR045890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02378 Pumo-Chr8 60995034 60999146 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02378 - - gmx:100780975 882.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02378 8 60995034 60999146 Pumo8g02378 8 60995034 60999146 ECH