Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02358 ATGAACACTCCGCCAGCGTTGACACTGCCATCGGAAACGTCGCCGTCTGTTGTGAACATGTTCAGAATCAACAAAGTTGCGGACCGTTTGGCTTGGCTTGCTCAACCTGGCAACCGAGGCGAATCTTACGAATTTTATAACCTCTGCCTCTCTCTCTCTCGAGGCATTGATTATGCACTTGCCAATGGCGAAACTCCAGCCAAGGCTCATGATCTGCCAGTACTTGTGAAACAGATATGTCAACTAAAAAATGATGAATGTTCACAAGCAGCTATGATGGTATTGATGATATCTATAAAGAATGCTTGTGAAATTGGATGGTTCCAAACAAAAGAATCTGAAGAACTTGTTACTATTGCCGATGAGATCGGAAAGGTCTACAGCAGTCTGGGGATAAATGTTGGACCTAGATCTTGCAGTACTGCAATATCAACAATAATGCAGAAGTTCTATCCTACAATGAAATTGGGTCCAATACTTGCATCGATTGAAGCCCAGCCTGGATATGGAGCTTCTGCGGTTGATTTTCATATTACCAAGAGTGAAGTTCTTAAAGACAAAATTTTTTTGTTGGTGGCACAAACAGATAACATTGAGACATCAGCATGCCTCATAAGTCCTCAGCAAGTGAATTTTCTCCTCAATGGAAAAGGAGTAGTCAATAGGACTAATGTTCAAATGGATGCTGGACCCCAGGTGCCAACTAATGTGACTGGTATGCTTAAATTTGGGACAAACCTTCTTCAAGCTGTGGGCCAGTTCAATGGTCGTTGTGTTGTGCTTGTTGCCTATATGAATGTTGCACCTTTGCCTGAGGATCCAGTTCTTCAAGATTATCTTCAGCCTGCTGTTACATCTGTTGATTCAGATTCAGATATTATCGAGGGGGCTTCACAGATTTCACTTAATTGTCCAATAAGCTTTACACGTATCAAGACTCCTGTTAAAGGGCATTCATGCAAACATTTCCAGTGTTTTGACTTTGATAACTTCATTAATATGAATTCAAAAAGGCCATCCTGGCGCTGCCCTCATTGCAATCAGTATGTCTGTTATGCTGATATTCGTCTTGACCAAAACATGGTTGAGATCTTGAAAAATGTTGGTGAGAACATTACGGAAGTGATTGTCCTTGCTGATGGATCATGGAAGGCAGTCTTGGAAAAGGATCATGATGTGAATAAAATGCAGAAGAAGGCCCCCAATTGTGAAAAGGAACAAACTCAACCACAAGAATTTTCTTGCCATCCTAGTACTGTTGACCTCACCAAAGATGATGATGGTTTGGATACAGTGGACTATTGTGAAATTGTAGATAGAAAACCTCCCCAGGCATCTATTCATAGTCAGTTTGTCACCCCAAATTTAACTTCCTTGGGTATGAACTCTACTGGTCTTAATCAAAATGTTGCCGCTCAAATAGATGACTTTTGGCCTGGAGTTTGTATTGGCCGTGGTAGGTCTGATACCCCAATGGTTGGTAACTCTGAGCTACCTGTTCTGCCTGATACTGTTTCTCCTGCATTTAATCAGGAATCTGCAGGTGTTAACTCTGCCATGCATAATCAATTTTTGGGACCAAACAACTTGCAGATGCAGATGAATCATATGAATTCAGTTAACGAGTATGGTAGGTCATCCTCAGTGCCAAGACATATTAATAGGACTCCAGTAGCTGTTCAGGCCCTCCCAGTCCAATCTCAGGCATTGGGACCACAGCAACATTCAATAACTAATTTGAATAGTTCCTTGCTACCTAGCAATTCCTCTGCTACTCCTCATATTTCTCATATTTCTTTGTCCAACCCTGCCTCTGTAGATACTTTGAATGCTATACTTAGTGATACGGAAAGACAGCAACATTTTTCTCGAACCCCAATGAATCTGCCTCAGGTCTCAGGTGTAAATTCACCTGCATTTCAGCATCACACCGCAACACAGAATCGGGTACCACTAATGAATACGGCAGCACCAACTCAACCGCAGAACCAATACAGACCTAATTCGTTCTCTGAATTTAGAAATTCGCACCTGCAGCAAGCTCTGAATCTCCGGCAACCCCCACCAAGATCATCTAATGCCCAATGGTCCCACATCCAGCAAGGTGTTCCACAATCTGGGAATTTGCAGGCAGCAGCCAGGGCTGCTGCACCGGCTGCCAGACAAGGTAGTTCCCATGCTGCCAGACCTACTACTCATAGCCATCAAGCTAGGGGTATGGTTGCTAACCAGCCTGCCAGATGGACAGTTCAAAATCAAAATACCGTAGCAGCCACCACCACACCTTTCCAGGGGTTGGCAGGAGAACAAAGAGGAAATACAGCACAGACAGTTTCTAGGACTGAAGAATTATTCAGTCTGCAATCTGAACAGAATTGGGCTCCCACAGGAAGAATGCGTGGAAGTCTAGATTTAAGTCAGCCTTACGATGAGTCTATTGCACAGCGAATAATTACGCCAACACAAGCTCAAAATTCAAGGCCACCAGGTCCACAACCCGTCCGACGGACCGGTATTTCCTCTTTGCAACCCACCACGACCCAACAGGATGTGCTTATTGCAAACAATAGAAATGCAAATGCTCATAATCGTTCTTCCAGTAGATAA 2607 0.4346 MNTPPALTLPSETSPSVVNMFRINKVADRLAWLAQPGNRGESYEFYNLCLSLSRGIDYALANGETPAKAHDLPVLVKQICQLKNDECSQAAMMVLMISIKNACEIGWFQTKESEELVTIADEIGKVYSSLGINVGPRSCSTAISTIMQKFYPTMKLGPILASIEAQPGYGASAVDFHITKSEVLKDKIFLLVAQTDNIETSACLISPQQVNFLLNGKGVVNRTNVQMDAGPQVPTNVTGMLKFGTNLLQAVGQFNGRCVVLVAYMNVAPLPEDPVLQDYLQPAVTSVDSDSDIIEGASQISLNCPISFTRIKTPVKGHSCKHFQCFDFDNFINMNSKRPSWRCPHCNQYVCYADIRLDQNMVEILKNVGENITEVIVLADGSWKAVLEKDHDVNKMQKKAPNCEKEQTQPQEFSCHPSTVDLTKDDDGLDTVDYCEIVDRKPPQASIHSQFVTPNLTSLGMNSTGLNQNVAAQIDDFWPGVCIGRGRSDTPMVGNSELPVLPDTVSPAFNQESAGVNSAMHNQFLGPNNLQMQMNHMNSVNEYGRSSSVPRHINRTPVAVQALPVQSQALGPQQHSITNLNSSLLPSNSSATPHISHISLSNPASVDTLNAILSDTERQQHFSRTPMNLPQVSGVNSPAFQHHTATQNRVPLMNTAAPTQPQNQYRPNSFSEFRNSHLQQALNLRQPPPRSSNAQWSHIQQGVPQSGNLQAAARAAAPAARQGSSHAARPTTHSHQARGMVANQPARWTVQNQNTVAATTTPFQGLAGEQRGNTAQTVSRTEELFSLQSEQNWAPTGRMRGSLDLSQPYDESIAQRIITPTQAQNSRPPGPQPVRRTGISSLQPTTTQQDVLIANNRNANAHNRSSSR 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02358 868 MobiDBLite consensus disorder prediction 704 738 - -
Pumo8g02358 868 SUPERFAMILY RING/U-box 300 375 - -
Pumo8g02358 868 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 31 486 - -
Pumo8g02358 868 Pfam MIZ/SP-RING zinc finger 300 348 IPR004181 GO:0008270
Pumo8g02358 868 CDD SP-RING_PIAS-like 301 348 - -
Pumo8g02358 868 ProSiteProfiles Zinc finger SP-RING-type profile. 289 370 IPR004181 GO:0008270
Pumo8g02358 868 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 271 385 IPR013083 -
Pumo8g02358 868 MobiDBLite consensus disorder prediction 820 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02358 Pumo-Chr8 60815364 60823560 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02358 K04706 - gmx:100780539 1471.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02358 8 60815364 60823560 Pumo8g02358 8 60815364 60823560 ECH