Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02356 ATGGGGTACAATTTGGTGTTCATTGGTGTGTTCTTGTGGTGTGCCATGGTTAGTCACATTAATGGACTAGTCATGATGGATGGGAAATTAATGAGTTCCTCGGCTAATTATGACTATGCAGATGCTCTTGGCAAAGCCATCTTGTTTTTTGAAGGACAACGCTCTGGGAAGTTGCCCACAAGCCAAAGAGTGAAGTGGAGGGGAGACTCGGCTCTCTCTGATGGCAAACTTCAAAACGTGGATTTGATTGGAGGATACTACGATGCTGGTGATAACGTAAAGTTTGGATGGCCGATGGCATTTACAACCACCTTATTGAGTTGGGCTGCTGTAGAGTACGAGAGTGAGATATCTTCGGTGAACCAGCTTGGTTACCTTCACAGTGCTATCCGTTGGGGTTCAGACTTTATATTGAGAGCCCACACTTCCCCAACCACCCTCTATACACAGGTGGGAGATGGAAACGCTGATCACAATTGTTGGGAGCGGCCGGAAGACATGGATACACCAAGGACAGTATACAAGATAGATGTTAATTCCCCAGGAACTGAAGCCGCAGCTGAGTCTGCTGCTGCTCTTGCTGCTGCTTCAATTGTCTTCAAGAAAATAGATGCCAATTATTCATCCACGCTATTAAGCCAGTCAAAATCACTGTTTGATTTTGCAGACAAGTACAGAGGTTCTTACTCGGGTTCTTGCCCATTCTATTGCTCCTACTCAGGATACCAGGATGAACTGTTATGGGCTGCTTCTTGGCTATACAAGGCGAGTGGAGAAAGCAAGTACTTGAGCTACATCACAGGCAACCAAGGTTGGAGTCAGGCGGTGTCTGAATTCAGCTGGGATAACAAATTTGTTGGAGCTCAGACACTACTTACGGAGGAATTCTATGGTGGCAAGAAAGACTTGGCCAAGATTAAGAGTGACGCTGAATCATTTATATGTGCAGTGATGCCAGGAAGTAGCTCTTTACAGATTAAAACAACTCCTGGTGGGCTTCTGTTTACTAGAGATAGCAGTAATTTGCAATATGCTACGAGCTCAACCATGGTGCTATTCATTTTCTCTAAAATCCTAAACAGAAATCATATTGATGGAATCCATTGTGGCTCGGCGCATTTCACCCCCTCTCAAATTAGAGCCTTTGCGAAAACACAGGTGGACTACATACTAGGAAACAATCCGATGAAGATGTCCTACATGGTGGGATTTGGCAGTAAATACCCAAAGCAATTACATCACAGAGGCTCATCCATCCCTTCAATAAATTTTCATCCGGCCAAAGTGGGTTGCAATAATGGTCTTTCAAATTATTATAATTCTGCTAATCCAAATCCCAATACTCATGTGGGTGCGATTGTTGGAGGCCCCGATTCAAATGACCAATTCAGTGATGCAAGATCTGACTATTCCCACAGCGAACCTACCACCTATATGAATGCTGCATTCGTGGGTTCAGTGTCTGCTTTGCTTGATAAAACGGCCCAAACCAATTTGAGGACTCTGCAGTTTCCCCAGATCCATGGTATTGGTAGGGAGATTAATGAAGTTAATTAA 1557 0.4419 MGYNLVFIGVFLWCAMVSHINGLVMMDGKLMSSSANYDYADALGKAILFFEGQRSGKLPTSQRVKWRGDSALSDGKLQNVDLIGGYYDAGDNVKFGWPMAFTTTLLSWAAVEYESEISSVNQLGYLHSAIRWGSDFILRAHTSPTTLYTQVGDGNADHNCWERPEDMDTPRTVYKIDVNSPGTEAAAESAAALAAASIVFKKIDANYSSTLLSQSKSLFDFADKYRGSYSGSCPFYCSYSGYQDELLWAASWLYKASGESKYLSYITGNQGWSQAVSEFSWDNKFVGAQTLLTEEFYGGKKDLAKIKSDAESFICAVMPGSSSLQIKTTPGGLLFTRDSSNLQYATSSTMVLFIFSKILNRNHIDGIHCGSAHFTPSQIRAFAKTQVDYILGNNPMKMSYMVGFGSKYPKQLHHRGSSIPSINFHPAKVGCNNGLSNYYNSANPNPNTHVGAIVGGPDSNDQFSDARSDYSHSEPTTYMNAAFVGSVSALLDKTAQTNLRTLQFPQIHGIGREINEVN 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02356 518 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 389 415 IPR018221 -
Pumo8g02356 518 SUPERFAMILY Six-hairpin glycosidases 36 499 IPR008928 GO:0005975
Pumo8g02356 518 PANTHER ENDO-1,4-BETA-GLUCANASE 26 493 - -
Pumo8g02356 518 FunFam Endoglucanase 35 495 - -
Pumo8g02356 518 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 463 481 IPR033126 -
Pumo8g02356 518 Gene3D - 33 505 IPR012341 GO:0005975
Pumo8g02356 518 Pfam Glycosyl hydrolase family 9 39 485 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02356 Pumo-Chr8 60798254 60801452 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02356 23 491 Glycoside Hydrolase AT4G23560 72.187 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02356 - - gmx:547834 929.858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02356 8 60798254 60801452 Pumo8g02356 8 60798254 60801452 ECH