Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02328 ATGGCTTCGGAGAAGATTTGCTCGATTCTCTTGTTTTGTGCTGTAATTTTGCTTCTCCGTGATGCTCCTTCTGTCATAGCTGGGGACATAGTTCACGACGACGATTCAACTCCCAAGAAGCCCGGTTGCGAGAACCAGTTCGTTCTGGTAAAAGTGCAAACTTGGGTCAATGGTGTAGAGGATGTTGAATTTGTTGGTGTGGGTGCCAGATTTGGCAGAGCCATTGTGTCCAAAGAGAAAAATGCAAAGCACACGCGCCTTATTCTTTCAGATCCTCGTGATTGTTGCATTCCGCCAAAAAATAAGATTGTGGGAGATGTCATCATGGTGGATCGAGGCAACTGCACATTCACAAAAAAGGCAAATATTGCTCAGAATGCTAATGCTTCAGCCATCCTCATTATAAATAACCAAAAAGAACTGTACAAGATGGTTTGCGAACCTGATGAAACTGATTTGAACATACACATACCTGCTGTCATGCTTCCACTAGATGCAGGAACAAGGCTGGAAAAAATGCTGACGAGTACTTCATCTGTGTCTGTGCAGCTGTACTCACCACTTCGACCAGCTGTTGACATAGCAGAAGTATTTCTTTGGATGATGGCAGTTCTTACCATATTGTGTGCATCATATTGGTCAGCTTGGACAACCCGAGAAGCAGCTATTGAACAGGATAAACTGCTAAAGGATGCTTCAGATGAAATCCCAAACACTAAATATGCTAGTGTTAGTGGAGTTGTAAATATGAATGTGAAAGCTGCAATCCTTTTTGTTGTATTTGCTTCGTGTTTCCTGTTTATGCTTTACAAACTGATGTCGTCATGGTTCATTGACGTTTTGGTTGTTCTCTTCTGTATTGGTGGTATTGAGGGCTTGCAAACATGCTTGGTTGCTGTTTTGTCCAGGTGGTTTAAGCATGCTGGAGAGTCATATGTCAAAGTACCTTTCTTAGGAGCTATCTCACACCTGACTTTGGCTGTTTCTCCATTCTGTATAACATTTGCCGTTCTCTGGGCAGTTTATCGCTACAAATCTTTTGCCTGGATTGGTCAAGATATACTTGGAATTGCACTGATAATCACAGTTCTACAGATTGTACATGTACCAAATCTCAAGGTTGGTACAGTTCTTCTCAGCTGTGCCTTCATTTACGACATCTTTTGGGTGTTTGTCTCAAAGAAGTTTTTCAAGGAAAGCGTCATGATTGTGGTAGCCCGAGGCGATCGAAGTGGAGAAGATGGAATTCCCATGTTACTGAAGTTCCCACGTATTTTTGATCCATGGGGTGGTTACAGCATCATAGGTTTTGGAGACATCCTTTTACCTGGAATGCTGGTGGCATTCTCACTCAGGTACGATTGGCTGGCAAATAAGAGCCTAAGAAGCGGATATTTCTTGTGGGCAATGTTTGCATATGGCTTTGGTCTTTTAATTACGTACGTGGCACTAAACTTGATGGACGGGCATGGCCAACCAGCACTGCTATACATCGTTCCATTTACCCTTGGGACCTTGATGACATTAGGGCGGAAGCGAGGAGATTTGAGGGTTTTGTGGACAAGTGGAGAACCTGAAAGACCCTGCCCACATATAAGACTCCAACACAGTGGAGAATTAAGCCTTGAATGA 1632 0.432 MASEKICSILLFCAVILLLRDAPSVIAGDIVHDDDSTPKKPGCENQFVLVKVQTWVNGVEDVEFVGVGARFGRAIVSKEKNAKHTRLILSDPRDCCIPPKNKIVGDVIMVDRGNCTFTKKANIAQNANASAILIINNQKELYKMVCEPDETDLNIHIPAVMLPLDAGTRLEKMLTSTSSVSVQLYSPLRPAVDIAEVFLWMMAVLTILCASYWSAWTTREAAIEQDKLLKDASDEIPNTKYASVSGVVNMNVKAAILFVVFASCFLFMLYKLMSSWFIDVLVVLFCIGGIEGLQTCLVAVLSRWFKHAGESYVKVPFLGAISHLTLAVSPFCITFAVLWAVYRYKSFAWIGQDILGIALIITVLQIVHVPNLKVGTVLLSCAFIYDIFWVFVSKKFFKESVMIVVARGDRSGEDGIPMLLKFPRIFDPWGGYSIIGFGDILLPGMLVAFSLRYDWLANKSLRSGYFLWAMFAYGFGLLITYVALNLMDGHGQPALLYIVPFTLGTLMTLGRKRGDLRVLWTSGEPERPCPHIRLQHSGELSLE 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02328 543 Pfam Signal peptide peptidase 247 524 IPR007369 GO:0004190|GO:0016020
Pumo8g02328 543 PANTHER SIGNAL PEPTIDE PEPTIDASE 75 527 IPR007369 GO:0004190|GO:0016020
Pumo8g02328 543 Gene3D - 56 187 - -
Pumo8g02328 543 SUPERFAMILY PA domain 103 178 IPR046450 -
Pumo8g02328 543 Pfam PA domain 96 170 IPR003137 -
Pumo8g02328 543 FunFam Signal peptide peptidase-like 3 49 188 - -
Pumo8g02328 543 SMART psh_8 246 513 IPR006639 GO:0004190|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02328 Pumo-Chr8 60510852 60517555 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02328 K09597 - gmx:100796300 1050.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02328 8 60510852 60517555 Pumo6g00499 6 6231630 6236574 PCT