Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02273 ATGATGAAAGGTTCGAAGCGTTTGGCTGTGTCGGAACCCAACCAGGTCGATACCAACGAAACGTTCCGGAATAAAAGAATAATGGAAGGATCCCTCTTCGATGTCCATAGGGCTGAACCATCTCAACAACCAATGGTGGCAGCACCAACATTGGATGTGAAACGGGCAGAGTCATCACAGCAGCATGTGAGAGCTTTAAATACCCAGTTTGCAAGTTGGGTTCAAACACAACTAAAGAATCATCCTGATGAGCTTTGGGAAGATGGTGTCAGAGATTACTTAGATCATGCTTCTAGCATTATGGAAAAGTTTAGTGATGTTGTCAACTGGCTCAAAGCAAATGCCACCAAGGCAGAAAATTCGGCTGCTGATGCTGGTGCTGCTTTTTCTGGGAAAAAGCTCTTGTCTGAAGTAATAAACAAAGAGAATAAATCTTTTGGAGAAAAAACTGGGTCTACTCCTGTTAGTACTGCTACAAATTTTGCTAGTTCTTGGAGCCCTGTATTATTTTCAAACAGTCAAAACATTTTTGGATTTGGAAATCAAAGTTCAGCTCTCTCTAATCAAAGTTCGGCTCCCTCTAATCAAAGTTTGGCTCCCTCTAACCACAATACTTCAGATGATGTAGATGGTGAAAATGAATTGGAGCAGCCTAGCAGCCCATCAGTTAAGAAGTCAGAAGAGAAAGGTGTAGTAGTTGTACATGAAGTAAAGTGCAAGCTTTATGTGAAGTCAAGTGATCCAGCAGATAAAGATGTATGGAAAGATAAAGGAATGGGCCAACTGTCTATTAAATGCAAAGAGGGAGTCAGCAAGGCTACCAAAGAGTCCAAACCTACAATTGTTGTTCGAAATGAGGTAGGAAAAATTCTTCTCAATGCCCTGTTGTATCCAGGAATCAAGACAAATCTGCAGAAGAACTCTCTTGTTGCAATATTCCATACTTCGGGCAATGCTGATGGAGGTGGTGGAGATAACAACAGTGTTGTTGCACGTACATTCTTGATTCGGATGAAAACAGAAGATGATCGAAATAAACTGGCTTCAACGATCCAAGAATATGCTCCAGTGTCTTGA 1077 0.4132 MMKGSKRLAVSEPNQVDTNETFRNKRIMEGSLFDVHRAEPSQQPMVAAPTLDVKRAESSQQHVRALNTQFASWVQTQLKNHPDELWEDGVRDYLDHASSIMEKFSDVVNWLKANATKAENSAADAGAAFSGKKLLSEVINKENKSFGEKTGSTPVSTATNFASSWSPVLFSNSQNIFGFGNQSSALSNQSSAPSNQSLAPSNHNTSDDVDGENELEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSSDPADKDVWKDKGMGQLSIKCKEGVSKATKESKPTIVVRNEVGKILLNALLYPGIKTNLQKNSLVAIFHTSGNADGGGGDNNSVVARTFLIRMKTEDDRNKLASTIQEYAPVS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02273 358 SMART ranbd_3 215 354 IPR000156 GO:0046907
Pumo8g02273 358 PANTHER RAN BINDING PROTEIN 9 355 IPR045255 -
Pumo8g02273 358 CDD RanBD_NUP50 227 355 - -
Pumo8g02273 358 Gene3D - 139 357 IPR011993 -
Pumo8g02273 358 ProSiteProfiles Ran binding domain type 1 profile. 225 353 IPR000156 GO:0046907
Pumo8g02273 358 MobiDBLite consensus disorder prediction 184 228 - -
Pumo8g02273 358 MobiDBLite consensus disorder prediction 184 206 - -
Pumo8g02273 358 SUPERFAMILY PH domain-like 225 355 - -
Pumo8g02273 358 FunFam AT4g11790/T5C23_220 112 357 - -
Pumo8g02273 358 Pfam RanBP1 domain 223 353 IPR000156 GO:0046907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02273 K14295 - gmx:100816975 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02273 8 59940755 59946956 Pumo8g02273 8 59940755 59946956 ECH