Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02258 ATGGTCAATTTGGATATGTCTTCTGATAGTGCAAAGGAAAATGCATCCGTAGTTGATTCATCAGTCACTGAATGGAGGAATGACATTGGAAATTCAGATGATCCAGAGAGCTCAGGTTACAAGTTTAATGAAAACATTAATCCAACTAGGGCAGATAAAGGGGGACATTCTCATGGTCAGATAGGGCATCCAACAGGAATTGGAGTGGAAAAATGGCAAAATATAAAATACTATATCATTAAGAGTTTGAACCATCAAAACATCCGTTTGTCGATTGAGAAAGGAATTTGGGCTACTCAAATTATGAATGAACCGATTCTAGAAGAAGCTTTTCATAATTCAGGCAGTGTAATCCTTATATTTAGTGTCAACATGAGTGGTTCCTTCCAAGGGTATGCACAAATGATGTCCTCCATTGGAAGGGGGAGAGACAATGTTTGGAGTGAGGGAACTGGTAAAAGTAATCCTTGGGGTCGCAGTTTTAAGGTCAAATGGCTGTGTTTGAATGATTTGCCTTTCCACAAGACTCTACATCTCAAGAATTCATTGAATGACTATAAGCCTGTCAAAATTAGCAGAGATTGCCAGGAGTTATCTCCAGACATTGGTCTAGCTCTTTGTGAACTTCTTGATGGTACGAATGATATGGATGGCCTGCTGACCAGTTCATCAAGGGATGAATTTTCTTTGAAAGGGCATTATGCGAATACTCCAAGTTCAATGGGAGATGAAGACTGTAACTTTCCTCCACTGCATATGCCGTGGTCAATGCCCATGCCTTATTCTTCCTTGTTTTACCAAAATCAACCAGAAGTAAATAAATTTCATTCAACAAACCAGAGAACCAGTGGGACAATGTTCACTGAAATATTGCCAACCACTTCTGAGTCATCACAAGTGTCAGGAAAAGGGATTAAACGTTCTAAGGATGTGACTTCTCAATTTGATTCTTGGGGCCTATCTTCTGGAAGCCCTTTAGCTAGTACCCTAACTGAGGATGATTTTCTTGACATGTCCTATGAAGAATACCTGGAGGTCCATAGCAGATGCAAGAAACAGTTACGCATCAGTTCACAGGAAACCATAATCAAGCCGTCAAAATTCTTTCTGGCAACTAAACCATCTTGGAAACAACTGGAATTGTTGAGAAGTAATTCGCATGATGATGATAGGAATATAGAAGACGGGGTTGATAGAGACAGGAGCAACTCTCATGGGATGATACATCAGTCATCTTTGCCATGGATATAA 1251 0.3989 MVNLDMSSDSAKENASVVDSSVTEWRNDIGNSDDPESSGYKFNENINPTRADKGGHSHGQIGHPTGIGVEKWQNIKYYIIKSLNHQNIRLSIEKGIWATQIMNEPILEEAFHNSGSVILIFSVNMSGSFQGYAQMMSSIGRGRDNVWSEGTGKSNPWGRSFKVKWLCLNDLPFHKTLHLKNSLNDYKPVKISRDCQELSPDIGLALCELLDGTNDMDGLLTSSSRDEFSLKGHYANTPSSMGDEDCNFPPLHMPWSMPMPYSSLFYQNQPEVNKFHSTNQRTSGTMFTEILPTTSESSQVSGKGIKRSKDVTSQFDSWGLSSGSPLASTLTEDDFLDMSYEEYLEVHSRCKKQLRISSQETIIKPSKFFLATKPSWKQLELLRSNSHDDDRNIEDGVDRDRSNSHGMIHQSSLPWI 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02258 416 ProSiteProfiles YTH domain profile. 75 210 IPR007275 GO:0003723
Pumo8g02258 416 MobiDBLite consensus disorder prediction 1 43 - -
Pumo8g02258 416 Pfam YT521-B-like domain 76 210 IPR007275 GO:0003723
Pumo8g02258 416 CDD YTH 76 210 IPR007275 GO:0003723
Pumo8g02258 416 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 71 219 IPR045168 -
Pumo8g02258 416 Gene3D ph1033 like domains 62 216 - -
Pumo8g02258 416 MobiDBLite consensus disorder prediction 387 416 - -
Pumo8g02258 416 MobiDBLite consensus disorder prediction 387 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02258 Pumo-Chr8 59708381 59712384 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02258 K20100 - gmx:100784130 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02258 8 59708381 59712384 Pumo8g02258 8 59708381 59712384 ECH