Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02247 ATGTCAGCAACATGTAAACTAGGAGACAACAACCTAAGCTTAAACGATAAAACCAACCAACCCCCTTCACCTCCTCAGACACAAAAATGCCCTGCCAATCTGATGAAGATGGTGGTCTCAGAGCTAAGAGTTCAACGAGGAATAGCCCTTCCAATGGTGGCCATGAATTTGGCTTGGTTTGCCAAGACAGCAATCACAACAGCATTTTTAGGCCGTCTTGGTGAGCTCAGTTTAGCAGGTGGAGCTCTCGGCTTCACTTTTGCTAATGTCACTGGCTTCTCTGTCCTCAATGGTCTATGTGGTGCCATGGAACCCATATGTGGACAGGCTCATGGTGCCAAAAACTTCAGACTCCTTCACAAGACACTTCTCATGACAACCTCATTGTTGCTATTGGTATCACTTCCCATCACTTTCTTGTGGCTTAATGTTGACAAAATTTTGATTCGTTTTGGCCAGCAACAAGACATCTCCACTGTGGCCAGGACCTATGTTTCCTGTCTCATACCTGACTTGTTTGTTGCCTCACTCTTCTGTCCCTTAAAAGCCTACTTGAGCTGTCAAAACATAACTCTTCCCACCATGTTTAGTTCAGCTGTGGCACTGGCTTTCCACATACCCGTTAACATAGTGCTCTCAAAGACCATGGGACTCAGAGGAGTTTCCATGGCAGTTTGGATAACTGATCTTATTGTTGTGGTTCTGCTGGCTATTTATGTTATAATTCTTGAGAACAAAAAGGAAAGCATGTGGAAGGAAGGAGGGTGGTGGGATCAAAGCATTGAAGATTGGATTAGGCTGCTCAAGCTTTGTGGATCATGCTGCCTCAACACATGCCTTGAGTGGTGGTGCTATGAGATTCTGGTTTTGCTTACTGGCCACCTCACAAATGCTAAGCAAGCAGTGGGAGTTTTGGCCATTGTGCTAAACTTTGACTATTTGCTTTTCTCAGTGATGCTATCACTAGCCACTTGTGTTTCCACACGTGTCTCAAATGAGCTTGGTGCGAACCAAGCTGGTCTTGCTTACCGATCAGCGTGTGTGTCTCTGGCATTGGGCTTTATCTCTGGTTGCATAGGTAGCTTGGTGATGGTGGCTGCCAGGGGAATTTGGGGGCCACTGTTTAGCCATGATATGGGTATTATAAAGGGAGTAAAGAAGACAATGTTGCTGATGGCTTTGGTAGAAGTGTTTAATTTTCCGTTGGCAGTTTGTGGAGGCATAGTTCGAGGGACGGCACGACCCTGGTTGGGCATGTATGCGAATCTAGGTGGATTTTATTCCCTGGCACTGCCACTTGGTGTTATTTTTGCCTTCAAACTCAGTCTTGGGCTTGTTGGACTTTTCATTGGACTTGTTACTGGTATCGTTACCTGCTTGACGCTGTTATTGGTATTTATTGCACGGTTAAATTGGGTGGAAGAAGCTGCCAAGGCACAAACACTAACAGGCAACGAGCACGTTAAGGAACTTCCCAAATATGACACAGAAAAACGAATTGACGCCCATGAAAAAGATGAAGTGTAA 1527 0.4532 MSATCKLGDNNLSLNDKTNQPPSPPQTQKCPANLMKMVVSELRVQRGIALPMVAMNLAWFAKTAITTAFLGRLGELSLAGGALGFTFANVTGFSVLNGLCGAMEPICGQAHGAKNFRLLHKTLLMTTSLLLLVSLPITFLWLNVDKILIRFGQQQDISTVARTYVSCLIPDLFVASLFCPLKAYLSCQNITLPTMFSSAVALAFHIPVNIVLSKTMGLRGVSMAVWITDLIVVVLLAIYVIILENKKESMWKEGGWWDQSIEDWIRLLKLCGSCCLNTCLEWWCYEILVLLTGHLTNAKQAVGVLAIVLNFDYLLFSVMLSLATCVSTRVSNELGANQAGLAYRSACVSLALGFISGCIGSLVMVAARGIWGPLFSHDMGIIKGVKKTMLLMALVEVFNFPLAVCGGIVRGTARPWLGMYANLGGFYSLALPLGVIFAFKLSLGLVGLFIGLVTGIVTCLTLLLVFIARLNWVEEAAKAQTLTGNEHVKELPKYDTEKRIDAHEKDEV 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02247 508 PANTHER MULTIDRUG RESISTANCE PROTEIN 34 472 - -
Pumo8g02247 508 MobiDBLite consensus disorder prediction 1 29 - -
Pumo8g02247 508 NCBIfam MATE family efflux transporter 51 448 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo8g02247 508 MobiDBLite consensus disorder prediction 1 23 - -
Pumo8g02247 508 Pfam MatE 51 210 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo8g02247 508 Pfam MatE 274 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo8g02247 508 CDD MATE_eukaryotic 41 478 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02247 Pumo-Chr8 59584814 59586340 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02247 K03327 - gmx:100804083 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02247 8 59584814 59586340 Pumo8g02247 8 59584814 59586340 ECH