Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02242 ATGGCCGATCTGTTTGCATGGCTCATCTCCTTCTTCCTCCTCATTGCCTTACTTGTCCTCGTCACTTACCAGCTAATGTGCCTGGCAGACCTAGAATTTGATTATATAAATCCTTATGACTCCTCATCTCGAATAAATAATGTGGTTTTGCCAGAATATATTACGCAAGCTGTCCTCTGCTGCTTCTACCTTGTTACCAGGCATTGGATTATGGCACTCTTCTGTGTTCCCTATCTTTTTCACAATATCCGATTGTATAGACAGGGAAGGCATTTGGTTGATGTTACTGAGATATTCAACCTGCTCTCTTGGGAAAAGAAGCAACGGCTTGTCAAACTCTTCTATCTTGTTTTTACCCTTTTCCTCTCTGTATTTTGGATGATTTACACATCATTGGATTAG 402 0.408 MADLFAWLISFFLLIALLVLVTYQLMCLADLEFDYINPYDSSSRINNVVLPEYITQAVLCCFYLVTRHWIMALFCVPYLFHNIRLYRQGRHLVDVTEIFNLLSWEKKQRLVKLFYLVFTLFLSVFWMIYTSLD 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02242 133 PANTHER CORNICHON-RELATED 4 125 - -
Pumo8g02242 133 SMART Cornichon_2 4 125 IPR003377 GO:0016192
Pumo8g02242 133 Pfam Cornichon protein 5 125 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02242 Pumo-Chr8 59555257 59557582 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02242 K20368 - gmx:100780362 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02242 8 59555257 59557582 Pumo8g02242 8 59555257 59557582 ECH
Pumo4g01610 4 20352295 20355465 Pumo8g02242 8 59555257 59557582 PCT