Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02112 ATGTTGGTCTTTCAAGCAAAGTTCATTAAACACATGGAAGCTTTTACTCAAAGGTGTATATCTAGATGGTCTGTTACACTTTACGCTCGTTACTCTGATACTCCTCAGAAGAAGTCTAAGCTTGCTCCTTTGCAGGAGAGAAGAATGATAGACCAGTGTAAGATATTTGCAAAAGCAGGTGATGGAGGTAATGGTTGCTCCAGCTTACGCAAGGGAAGACCTGATGGTGGCAATGGGGGGAGAGGTGGTGATGTGATTCTGGAATGCTCTCCCAGAGTTTGGGACTTCAGTGGTTTGCAGCGTCACCTGATAGCCGAGAAAGGAGGACCTGGATCATCAAAAAAGTTGATAGGTAGCAGGGGTGCTGATAAGGTTGCCCGCGTACCGATTGGCACTGTACTTCATCTTGTTAACGGTGATATTCCTTCCGTTGTCAAAACTCAATCCTCAACAGATGTAGACCCTTGGGAGATTCCTGGGGCACTTGTTGATGATTTTCCTGACCCTGGCGATGGTTCTACCTCCAGTGTTACAAGTGGGGAAGTCAAAGCAATACATTCTACTGGCTGCTCCTCATCACAAGATGAAGAAACAAATGTTAAGAAATCTGAAAAATCAAGACAAGTTATATCAACAGATGTATTTTCTCAACTCTCCACTTCTAATGGAGCTCCTGAATTTGGAACAGAGGATATAGGAGAGAAACAAGAGATACTATACAATGTTGCTGAGTTAACAGAAGAAGGTCAACAAATTGTCATTGCTCGTGGAGGAGAGGGTGGTCTGGGCAATGTGTCTTGTTCCAAAGATTCAAGGAAGGCTGTGACTATGAAGGCATTTTCACGCCCACACATATCTAAACTTGAGGACCCTGACTCCTCTCTGCATGCAGGTTCACTTGGTTCTGAGACTGTTCTTATATTAGAACTCAAGAGTATTGCTGATGTGAGCTTTGTGGGAATGCCTAATGCTGGTAAAAGCACTTTACTTGGGGCTATATCAAGGGCTAAGCCTGCTACTGGTGACTATGCCTTCACTACTCTTAGGCCAAATTTAGGGAATCTAAACTATGATGATCTCTCAATAACTGTGGCTGATATTCCTGGACTTATAAAAGGTGCACACCAAAATCGTGGACTTGGACATGCATTTCTGCGCCACATAGAACGCACAAAGGTTCTTGCTTATGTGGTAGACTTGGCTGCTGCTTTAAATGGAAGAAAGGGAATTCCACCATGGGAACAGCTGAGAGACTTAATTCTAGAGCTAGAGTACCATCAGGACGGTTTATCCAATCGGCCATCCTTGATAGTCGCAAATAAGATTGATGAGGAAGGTGCAGATGAAGTGTATAAAGAGTTAAAGAGAAGGGCCCAGGGTGTTCCCATCTTTCCTGTGTGTGCTGTTTTGGGGGAAGGGATAGCAGATCTTAAAGCTGGCCTTAAAATGCTTCTCAATGCTGAAATGTCAGCTACACTTTGCCTAGATCAAATTTTGCTTGCTTAG 1506 0.4376 MLVFQAKFIKHMEAFTQRCISRWSVTLYARYSDTPQKKSKLAPLQERRMIDQCKIFAKAGDGGNGCSSLRKGRPDGGNGGRGGDVILECSPRVWDFSGLQRHLIAEKGGPGSSKKLIGSRGADKVARVPIGTVLHLVNGDIPSVVKTQSSTDVDPWEIPGALVDDFPDPGDGSTSSVTSGEVKAIHSTGCSSSQDEETNVKKSEKSRQVISTDVFSQLSTSNGAPEFGTEDIGEKQEILYNVAELTEEGQQIVIARGGEGGLGNVSCSKDSRKAVTMKAFSRPHISKLEDPDSSLHAGSLGSETVLILELKSIADVSFVGMPNAGKSTLLGAISRAKPATGDYAFTTLRPNLGNLNYDDLSITVADIPGLIKGAHQNRGLGHAFLRHIERTKVLAYVVDLAAALNGRKGIPPWEQLRDLILELEYHQDGLSNRPSLIVANKIDEEGADEVYKELKRRAQGVPIFPVCAVLGEGIADLKAGLKMLLNAEMSATLCLDQILLA 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02112 501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 315 485 IPR027417 -
Pumo8g02112 501 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 36 482 IPR045086 GO:0003924|GO:0005525
Pumo8g02112 501 ProSiteProfiles Obg domain profile. 47 313 IPR006169 -
Pumo8g02112 501 PIRSF GTP-binding_obg 46 494 IPR014100 GO:0000287|GO:0003924|GO:0005525
Pumo8g02112 501 MobiDBLite consensus disorder prediction 171 196 - -
Pumo8g02112 501 SUPERFAMILY Obg GTP-binding protein N-terminal domain 49 277 IPR036726 -
Pumo8g02112 501 Gene3D - 313 493 IPR027417 -
Pumo8g02112 501 MobiDBLite consensus disorder prediction 159 206 - -
Pumo8g02112 501 Gene3D GTP1/OBG domain 49 312 IPR036726 -
Pumo8g02112 501 Pfam GTP1/OBG 50 135 IPR006169 -
Pumo8g02112 501 CDD Obg 314 485 IPR031167 GO:0005525
Pumo8g02112 501 Pfam 50S ribosome-binding GTPase 316 441 IPR006073 GO:0005525
Pumo8g02112 501 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 314 486 IPR031167 GO:0005525
Pumo8g02112 501 PRINTS GTP1/OBG GTP-binding protein family signature 381 399 IPR006073 GO:0005525
Pumo8g02112 501 PRINTS GTP1/OBG GTP-binding protein family signature 337 355 IPR006073 GO:0005525
Pumo8g02112 501 PRINTS GTP1/OBG GTP-binding protein family signature 364 379 IPR006073 GO:0005525
Pumo8g02112 501 PRINTS GTP1/OBG GTP-binding protein family signature 316 336 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02112 Pumo-Chr8 58083634 58086409 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02112 - - gmx:100808337 884.404