Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01978 ATGAAGAACACCAACAGCAACACAAAACTGATCCTCCTCCACCCATATATCCAAAAACAAGGAAGCTCCAACCGCCTATGGCTTCTAGCCTTCATATCCTTCTTCACCTTGGCCTTCCTTGCCACCCTCATTTACACCAGAGACACAACAACAACCTCATCTACCACTACCACTACTACCACCTCTTCCACCCCTTTATCTAGTTTCACCAACACCCATCTACCATCCACTGTAATCAACACCCTTCTCCACTATGCCTCAAAATCCAACGACAGCTACCACATGCCCCACTCAGACCTCAAAACCATCTCCGATGTGCTCCGAAAGTGCTCATCGCCATGCAACTTCCTCATCTTCGGCCTCACCCACGAGACCCTCCTCTGGAAAGCCCTCAACCACAACGGAAGAACAGTCTTCATCGACGAAAACCGGTACTACGCCGCATACTTCGAAGAAAAGCACCCCGAGATCGATGCCTACGACGTGCAATACACGACCAAAAGGAGCGAGTTGAAGGAGCTGATAGCTTCGGCGAAAGAACAGGTAGGAAACGAGTGCAGGCCAGTGCAGAATCTTCTGTTTTCTGAGTGCAAGTTGGGACTGAATGACCTTCCAAACCATGTTTATGAAGTGGATTGGGATGTGATATTGGTGGATGGGCCCAGGGGTGACTGGCCGGACGCTCCCGGAAGAATGTCGCCGATCTTCACCGCCGGCGTGCTTGCCCGGAGCAAGAAGGGTGGGAACCCGAAGACGCATGTGTTTGTGCATGACTTCTCAGGGAAAGTGGAAAAGGTTTCTGGGAACGAGTTTCTGTGCAAGGAAAATTTGGTGGAGGCAACTCACTCTTTGGGACACTATGTGCTGGAAAAAATGGATGAGAGTAGCGTCCAGTATTGTAAGAATCACAATCGCTCATCAGGGGCTGCTTCTTCGTCTTAG 942 0.5032 MKNTNSNTKLILLHPYIQKQGSSNRLWLLAFISFFTLAFLATLIYTRDTTTTSSTTTTTTTSSTPLSSFTNTHLPSTVINTLLHYASKSNDSYHMPHSDLKTISDVLRKCSSPCNFLIFGLTHETLLWKALNHNGRTVFIDENRYYAAYFEEKHPEIDAYDVQYTTKRSELKELIASAKEQVGNECRPVQNLLFSECKLGLNDLPNHVYEVDWDVILVDGPRGDWPDAPGRMSPIFTAGVLARSKKGGNPKTHVFVHDFSGKVEKVSGNEFLCKENLVEATHSLGHYVLEKMDESSVQYCKNHNRSSGAASSS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01978 313 NCBIfam TIGR01627 domain 72 300 IPR006514 GO:0045492
Pumo8g01978 313 Pfam Polysaccharide biosynthesis 99 286 - -
Pumo8g01978 313 PANTHER OS11G0490100 PROTEIN 5 301 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01978 Pumo-Chr8 56404844 56407272 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01978 - - gmx:100817866 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01978 8 56404844 56407272 Pumo4g01934 4 26201534 26202810 ECH
Pumo8g01978 8 56404844 56407272 Pumo8g01978 8 56404844 56407272 ECH
Pumo8g01978 8 56404844 56407272 Pumo4g01934 4 26201534 26202810 PCT