Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01888 ATGGGGGATATTAGGCTTACCCGGGTAGAGCAAGGTCAAACAAAGATTAAAAATGTTCCAATTGCTGTCACCCCTGAAGGATTTTGGTGTTGCCCTACGCCTGTTGGGTTTCAGAAAAGCCTCAAACCTCAAAACCCTTTGAATAAACTCAAACCCTCTTCACCACCTCCAAAGAGTAGTTCCCAGAAAAAGGCAGTCTCAGTGAGTGAGAGAAAAACAGTTACAGTGCCTGCCCCATCAAGATTGGTGGTTTCAGATGCTCAACAATGTAATGATGATCCAGAAAGACCTCCACCTAGCACATCTGTGCCTGCACAGAGAGCACCCAGACCCAAACTTGAATCTTTACCCAAAAAGGTGGCTATTGAGTTTGGTGAACCTGGAACTTGTGACATGAAGCTGCTTCTCCTTGGAAAGCAGGGATTTTGTGTAAAGCTAAGTGTGCACAAGGACGTTCTAATAGAGAAGAGTAGTTTCTTTGCTGATAAACTTTCTGAACAATCTGGTTTGTCATGTCTCCAAGTTGATGACTGTGAGGATGTTGAAATATATGTTGAGACTGTTGGGCTTATGTACTGCAAAGACATGAAACAACGGCTGATGAAGCAAAGTGTTTCTCGCATTCTTCGAATACTCAAGGTTGCAGAATTCCTTGGCTTCAGCTCATGCATCCAATCATGTTTGGAGTACTTGGAGGCAGTCCCTTGGAACGGAGAGGAAGAAGAGGAAAAGGTGATCTCAACCGTCCTACGACTCCAAGGAGAAGGAATCGGGGTAAATCCGGTGCTAAAACGAGTTTCTCCTGATATTTCTAATGCCCCAAGAGATACTCTCTCCCAAATTGTTGAACTTGTTCTCAAAAGCAATGAGGAGAGAGGCCGCCGAGAGATGAAATCCATAGTTCTAAAGCTCCTTAGGGAGAATAACAGTCTTCCAAGCTCTGCAGGTTCAGCTGACATCTGTAATGACATGATTTACAAATCATGCATAAGCTGCATGGATTCTTTATTGTGTCTGTTCAGCCAGGCTGCAGAACCAGGCTTTGGAGACATACCTAGTGATAACAAAGAACCTGTAGTAAAACATATAGCTCTTGAAGCTGATAACTTGTCATGGTTGCTTGAGATTTTAGTTGACAAACAAGCTGCTGAAGATTTTGCACTGATGTGGGCAAACCAGCAGGAATTGGCAGCCCTACACGGAAAGCTTCCGATTGCATTTCGCTATCATGTCAGCTGCATTTCAGGAAGACTATATGTTGGCATTGGAAGAGGGGAGCTTTTGCCATCGAAGAACACACGCCAGTTGTTGTTGCAGACATGGCTACAGCCTCTAATCAATGACTACAACTGGTTGCAGCACGGGTGCAGGTCGTTTGATAGGAAACTTGTGGAGGAAGGAATTGGAAGGACAATTCTGACCTTGCCTTTGGAGGATCAGCAGAGTATTTTGCTTTCATGGGTTGGAAGCTTCTTGAAAACTGGTGATGGCTGTCCCAATCTTCAGAGAGCTTTTGAGGTCTGGTGGCGGAGGACTTTCATTAGGCCATATGTGGAAGGCCAGGGTAATGCCATGCCAGATAGTTGA 1587 0.4474 MGDIRLTRVEQGQTKIKNVPIAVTPEGFWCCPTPVGFQKSLKPQNPLNKLKPSSPPPKSSSQKKAVSVSERKTVTVPAPSRLVVSDAQQCNDDPERPPPSTSVPAQRAPRPKLESLPKKVAIEFGEPGTCDMKLLLLGKQGFCVKLSVHKDVLIEKSSFFADKLSEQSGLSCLQVDDCEDVEIYVETVGLMYCKDMKQRLMKQSVSRILRILKVAEFLGFSSCIQSCLEYLEAVPWNGEEEEEKVISTVLRLQGEGIGVNPVLKRVSPDISNAPRDTLSQIVELVLKSNEERGRREMKSIVLKLLRENNSLPSSAGSADICNDMIYKSCISCMDSLLCLFSQAAEPGFGDIPSDNKEPVVKHIALEADNLSWLLEILVDKQAAEDFALMWANQQELAALHGKLPIAFRYHVSCISGRLYVGIGRGELLPSKNTRQLLLQTWLQPLINDYNWLQHGCRSFDRKLVEEGIGRTILTLPLEDQQSILLSWVGSFLKTGDGCPNLQRAFEVWWRRTFIRPYVEGQGNAMPDS 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01888 528 MobiDBLite consensus disorder prediction 41 72 - -
Pumo8g01888 528 Gene3D Potassium Channel Kv1.1; Chain A 124 252 IPR011333 -
Pumo8g01888 528 MobiDBLite consensus disorder prediction 84 112 - -
Pumo8g01888 528 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 119 521 IPR038920 -
Pumo8g01888 528 MobiDBLite consensus disorder prediction 41 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01888 Pumo-Chr8 55366724 55371170 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01888 - - gmx:100818853 970.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01888 8 55366724 55371170 Pumo8g01888 8 55366724 55371170 ECH