Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01871 ATGATGGGAGGTCAATCCAGTAAGATACCCAGTAGTAGTGATGTTCCAACACCCATCAAAATGGGTACCCATTCTCTGTATGCGGCTGATTTAAGCTCTTATGAAGCGGCATGTGTTGAAGATCCAAACTTGCAATCCCTAGATGCTACCATTCAGGAGCGCACCAACAGGGTGATCACCTCGCTTGCTACTGGGATTGAGGTTCGTTCCATATCCATTGGGTCACTAGGGGAAGTGACTGGTAGTTTGCTTGAAATGAATCAGGATGTTGCCAAAGTCATTCTAGAGTGCAAGCAAGATATATGGAACAAGAAGGACAGGGAGCTGTTCTCCCTAGTGGAGGACTTCTTTGAAAATAGCCTCCAGACATTGGAATTCTGCAATGCTCTTGATAAATGCTTGAATCGAGCACGCGAAAGACATGTTATAGTTAAGTCTGCGATTACCTGTTTTGAGGAAGAGGTGCAAAATGGGGTTGAAGGGTCCACTTATTTGAAGACATTGCAAGAGCTTAAGGGTTTCAAGGAAGCCGGGGACCCCTTCACCGAAGAGTTTTATTCCTTGTTTCAGTCAGTTTATCAACAGCAAGCATCAATGCTGAAGAAATTGCAAATTAGGAAGCAAAAGCTTGATAAGAAACTGAAGTCCCTCAAGACATTGAAGAGGGTGTCAAATGCCATTTTCGTGGCTGCTTTCGTGTCTGTTTTGATTTTCTCGGTGGTCGCAGCTGCAATTGCTGCACCGCCTGTTGTAACTGCTTTGGCTGGTGCATTGGCTGTTCCAATAGGCTCAGTGGGGAAATGGTGTAACTCTCTTTTTAAGCGATATGAGACAGCTTTAAAGGGCCAAAGAGAACTAATCAGTTCTATGCAAGTTGGTAGTTACATTACATTGGTGGACTTGAAAAACATTCGGGTGCGCATCGACCAATTGGAAATAAAGATTGAATCCATGTTGCAGAGTGCTGATTTTGCTCTTAGAAATGAGGATGCTGTAAAGTTTGCGATTGATGAGATTAAGAAGAATATAGACACTTTTGCAGAGACCATTGAGACTTTGAGTAAGCAAGCTGATGAATGTAGTCGGCAGATAAGGAGAGCAAGGACTGTGGTCGTGAAAAGGATTATTAATTACACAAACACTAGTTGA 1149 0.4308 MMGGQSSKIPSSSDVPTPIKMGTHSLYAADLSSYEAACVEDPNLQSLDATIQERTNRVITSLATGIEVRSISIGSLGEVTGSLLEMNQDVAKVILECKQDIWNKKDRELFSLVEDFFENSLQTLEFCNALDKCLNRARERHVIVKSAITCFEEEVQNGVEGSTYLKTLQELKGFKEAGDPFTEEFYSLFQSVYQQQASMLKKLQIRKQKLDKKLKSLKTLKRVSNAIFVAAFVSVLIFSVVAAAIAAPPVVTALAGALAVPIGSVGKWCNSLFKRYETALKGQRELISSMQVGSYITLVDLKNIRVRIDQLEIKIESMLQSADFALRNEDAVKFAIDEIKKNIDTFAETIETLSKQADECSRQIRRARTVVVKRIINYTNTS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01871 382 Coils Coil 193 220 - -
Pumo8g01871 382 PANTHER UPF0496 PROTEIN 3-RELATED 27 376 IPR007749 -
Pumo8g01871 382 Coils Coil 336 370 - -
Pumo8g01871 382 Gene3D - 125 371 - -
Pumo8g01871 382 Pfam Protein of unknown function (DUF677) 44 375 IPR007749 -
Pumo8g01871 382 Coils Coil 301 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01871 Pumo-Chr8 55100425 55102936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01871 - - gmx:100819451 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01871 8 55100425 55102936 Pumo8g01871 8 55100425 55102936 ECH