Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01856 ATGGAGCCTCGCAAAGCTTTGCCATTATCTTGGGTCTTGATCTTCTTCCTTGCTATTTCCTTGTGTGGAGTGAAGGCATTAAGTGAAGAACATCATGCCAAGCCTCAAGAGGGACCTGTGGTGGAAAGGGATCAGAGGAGGACATTAGTTGTCACTGAATTTGGAGAGATCACTGCCATTGACATCAAGGAAGGACCAAAGGGACTGCCCTACCATCTTCAGTTCATCACATTGGAGCCAAACTCGCTATTTCTTCCCGTGCTTCTCCACGCAGATATGGTCTTTTATGTTCATACAGGGAGTGGAAGGCTGACTTGGGCAAATGATGATGGTACTAGTACGATTCGTTTACGCGAAGGAGATGTCTGCAGTCTCAACGAAGGATCTGTTTTCTATATACAGAGCAACTTAGAGGCCGAGAGGAGGAAACTTAGGATTTATGCAATGTTTACCAATACGGACGACAATACTTACGATCCATCAATCGGTGCTTACTCAAGGATCAATGAACTGGTCAAAGGCTTTGATAAGAAAATCATGCAAGCAGCTTTAAAGGTGCCGGAAGATTTGATTGAAGAAATTATTTACAAGAGCAACACCCCAGCTATAGTGCATGCGGTTTCTGAGAAGAGGAATATTGTCCAGGAGCTGGAGGCTTCGTTTCTTAGAAACTTTTTAGGCGTTGGGTCCAACTCCAAGAAACTCAAAACATACAACATCTTTGATCATGACCCTGACTTCAAAAATCGTAATGGTTGGAGCACAGCAGTGACCAAAAAGAAACTAAAGTCATTGAAGCGGACCAACATTGGATTTCTGATGGTGAATTTGACCATGGGATCAATATTGGGGCCACATTGGAACCCGAAGGCAACTGAGTTGGCAGTGTCAGTTGATGGGGGAGGCATGGTGCGAGTAGTATGTGGAAGCAGCAATGAAGATGATGAGACAGAATGCCAAAACATGAGGTTTAAGGTTAAGGAGGGTGATGCTTTTGTGGTGCCTAGGTTTCATCCAATGGCTCAGATGTCATTCAACGATGAACCGTTTGTCTTTCTGGGCTTCAGCACTTCAGCAAAGAAAAACCATCCTCAATTTTTGGCGGGAAAGGGATCAGTGCTTCATATTCTAGACAAACAGATACTGGCTACCTCTTTCGGTGTGAGTAACGGAACCATTGAGCAGCTTTTGCGTTCTCCAGATGATTCCATCGTTTTCAGGTGCAGTTCCTGCGCAGAGGAAGAGGAGAAGATGATGAAGGAGGAGGAAGAGAAGAGAAAGAGAGAGGAGGAAGAGGAGGAGAGGAAGAAAAAAGAGGAGGAAGAGGAGAGGAAGAAAAAAGAAGAGGAAGAGAGGAAGAAAAAAGAGGAGGAAGAGGAGGAGAAGAAGAAAAAAGAGGAGGAGGAGAGAAAAAGAGAGGAAGAGAGGAAAAAAGAGGAGGAGAGGAAGAGAGAGGAAGAGGAAGCTAAAAGGCAACAAGAAGAGAGGGAAAAGAAGCGAGAGGAGGAGGAAGCTAGGAAAGAAAGAGAGGAAGAGAGGGAGCAAGAAGAAGCTAGGAGAGAGAAAGAAAGGGAAAGAGAAGAAGAAAGAGAGAGGGAAGAAGAAGAAGCTAGAAGGCAACAGGAGAAGAGGGAAAAGAAGAGAGAGAGAGAAAGGGAAAGAGAAGAAAAAGAGAGAGAAAGGAAGCAAGCAGAGGAGGAAGCTAGGAGAGAACAAGAAAGGGAAAGGGAAAGAGAAGAGGAAGCAGAAAGGGAAGAAGAAGAAGAAGAAGCCAGAAGAGAGCAAGAAAGGAGGAGAAAAAGAGAAGAAGCAGCTGCTAAAAGAGAGCAAGAAAAGAGGGAAAGGAGGAGACAAGAGGAGGAAGCTAAAAGAAGAGCAGAAGAAGAGGCAGAAAGGGAGCAAGAACAAGCTACAAGAGAAGAAGAAGAAGAAGCAGCACGGAGGGAAAAAGAACAAGCTAAAAGAGAAGCAGAAGCAGCAGCACAGAGGGAACAAGAACGGGCTAAAAGAGAGCAAGAAAAGAGAGAAAGGAGGCGGCAAAAAGAAGCAGCTGCTAAAAGAGAGCAAGAAAAGAGGGAAAGGAGGAGACAAGAGGAGGAAGCTGAAAGAAGGGCAGAAGAGGAGGCAGAAAGGGAGCAAGAACAAGCTAAAAGAGAAGCAGCAGCAGCACAAAGGGAACAAGAACGGGCTAAAAGAGAGCAAGAAAAGAGAGAAAAGAGGCGGCAAGAAGAAGCTAGAAAAGAGCACGAAAGAAGGGGAGAAGAGGAGGAAGAACAAGCAGGAAGAGAGCACGAAAAGAGAAAAGAAGAAGAAACAACAAGGAGGGAACAAGAACAAGAAGAGGCTGAAAGACAACAGCAAAAGAGAGAAAGGAGGCGACAAAAGGAGAAACAAAGAGAAAGAGAAGGAGAAGGAGAAGAAGAAGGAGAAGAAGAAGAAGAAGGAGTAAGGAGAGAGAAGGGGAAAAGTCCAGAAGATGAAGGAGTAGAATGGGAGCAAGAAGAAGCCAGGAGACAGCAAAAAGAGAGGGAGAGAAGAAGAGAGCGAGAGAGTGATAACACACACAGGGAAAGAGGAGTAGAAGAGCAAAGCCAAAGGAGCAGCCTTGAAGGAAGGAGAGTTTTGAAAATAAGGAACGTTTGA 2643 0.4499 MEPRKALPLSWVLIFFLAISLCGVKALSEEHHAKPQEGPVVERDQRRTLVVTEFGEITAIDIKEGPKGLPYHLQFITLEPNSLFLPVLLHADMVFYVHTGSGRLTWANDDGTSTIRLREGDVCSLNEGSVFYIQSNLEAERRKLRIYAMFTNTDDNTYDPSIGAYSRINELVKGFDKKIMQAALKVPEDLIEEIIYKSNTPAIVHAVSEKRNIVQELEASFLRNFLGVGSNSKKLKTYNIFDHDPDFKNRNGWSTAVTKKKLKSLKRTNIGFLMVNLTMGSILGPHWNPKATELAVSVDGGGMVRVVCGSSNEDDETECQNMRFKVKEGDAFVVPRFHPMAQMSFNDEPFVFLGFSTSAKKNHPQFLAGKGSVLHILDKQILATSFGVSNGTIEQLLRSPDDSIVFRCSSCAEEEEKMMKEEEEKRKREEEEEERKKKEEEEERKKKEEEERKKKEEEEEEKKKKEEEERKREEERKKEEERKREEEEAKRQQEEREKKREEEEARKEREEEREQEEARREKEREREEEREREEEEARRQQEKREKKREREREREEKERERKQAEEEARREQEREREREEEAEREEEEEEARREQERRRKREEAAAKREQEKRERRRQEEEAKRRAEEEAEREQEQATREEEEEAARREKEQAKREAEAAAQREQERAKREQEKRERRRQKEAAAKREQEKRERRRQEEEAERRAEEEAEREQEQAKREAAAAQREQERAKREQEKREKRRQEEARKEHERRGEEEEEQAGREHEKRKEEETTRREQEQEEAERQQQKRERRRQKEKQREREGEGEEEGEEEEEGVRREKGKSPEDEGVEWEQEEARRQQKERERRRERESDNTHRERGVEEQSQRSSLEGRRVLKIRNV 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01856 880 MobiDBLite consensus disorder prediction 814 880 - -
Pumo8g01856 880 Pfam Cupin 238 390 IPR006045 -
Pumo8g01856 880 Pfam Cupin 50 185 IPR006045 -
Pumo8g01856 880 Coils Coil 761 799 - -
Pumo8g01856 880 Gene3D Jelly Rolls 30 221 IPR014710 -
Pumo8g01856 880 Coils Coil 831 853 - -
Pumo8g01856 880 Coils Coil 411 759 - -
Pumo8g01856 880 PANTHER OS03G0336100 PROTEIN-RELATED 10 411 - -
Pumo8g01856 880 CDD cupin_7S_vicilin-like_N 49 210 - -
Pumo8g01856 880 MobiDBLite consensus disorder prediction 413 880 - -
Pumo8g01856 880 SMART Cupin_1_3 238 394 IPR006045 -
Pumo8g01856 880 SMART Cupin_1_3 39 192 IPR006045 -
Pumo8g01856 880 SUPERFAMILY RmlC-like cupins 4 399 IPR011051 -
Pumo8g01856 880 Gene3D Jelly Rolls 229 411 IPR014710 -
Pumo8g01856 880 CDD cupin_7S_vicilin-like_C 245 403 - -
Pumo8g01856 880 MobiDBLite consensus disorder prediction 413 579 - -
Pumo8g01856 880 MobiDBLite consensus disorder prediction 590 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01856 Pumo-Chr8 54873172 54876394 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01856 5 419 Miscellaneous Gene Families AT2G18540 45.045 1.38e-119 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01856 - - gmx:100780895 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01856 8 54873172 54876394 Pumo8g01856 8 54873172 54876394 ECH