Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01855 ATGATGCCTGGCATTCTCTCAAGGCTGAATGCTACCATTTACTGTCGCATTCGGGAAGCAATAACACGGCAACAAGGAGTTCCAACATCCTTGGACAGAATTTCAGCTTTGTCTCTTTGTTCATTGTATTCAACTTCCTTCTTGCCCGGTTCCACTTATTGCACTTCAAGTCACATGCTTAACATAAAATCAATGGTTACTGCCTCACATTCCAATGCTGTGCTGGGAGATGTTTATGTTGATGGCTTAATCTCAAGTTGTGGTGGTGTGTTAGACTCCACAAAGCCTGCTGTTGTGTACTTCAAAGACAGAACTCATAAAGGTTGCCTGAGAGGTAGTGTGAATCTAAGGAGACCACAAGCTTTGTGTGGTCCTTTGAGTTTTGGGTGTTCTACTTTTGATGCTAATTGGAGGATCCGGGATTCGAGTTTGCTTCATGGATCTTGGCTCAAGAATTTCTCTACCTCTTATTCTACTTGTTCCTCAGCTGGGGCTGCACATGCTGTCTCATTTGATGGCAGCCCTCCTGATGAACAGCTTGCAAATTCCTCTTTTTCGCCTGATCCAACTACTGTTGATGGCAAGCCCTTGAAGATGTTGTCAGGATCTTGTTACCTACCGCATCCAGACAAGGAGGAGACAGGAGGAGAGGATGCTCATTTTATTTGCACAGATGAACAAGCAATTGGTGTTGCTGATGGTGTAGGTGGTTGGGCAGATGTTGGTGTTAATGCAGGACTGTTTGCCCGGGAACTTATATCCAATTCAGTGAGAGCAATTCAAGAGGAGCCCAAAGGTTCTTTTAATCCAACAAGGGTGTTAGAGAAAGCTCACTCAAATACAAGGGCCAAGGGTTCATCAACGGCTTGTATTGTTGCTCTTACTGATAAGGGACTACATGCTATTAATTTGGGTGACAGTGGATTTATTGTGGTTAGAGATGGATGCACCATTTTCCAGTCCCCTTTTCAACAGCACGACTTCAATTTCACGTATCAGTTGGAGAGTGGCAATGGTGCTGATCTACCCAGCTCTGGTGAGGTTTTTACCATACCTGTTGCTTCAGGAGATGTGGTGATTGCTGGAACAGATGGCTTATTTGACAATTTGTACAATAGTGAGATCACTGCAGTTGTTGTACATGCAATTAGGGCTGGACTAGAGCCCCAAGTAACTGCTCAGAAGATAGCAGCACTGGCACGTCAGCGAGCACTGGACACGAGTAGGCCGACACCATTTTCTACTGCTGCTCAGGAGGCTGGATTCCGTTATTATGGTGGCAAACTTGATGACATAACTGTTGTTGTCTCATACATATCCGGCTCAGTCAGCAAATGA 1338 0.4492 MMPGILSRLNATIYCRIREAITRQQGVPTSLDRISALSLCSLYSTSFLPGSTYCTSSHMLNIKSMVTASHSNAVLGDVYVDGLISSCGGVLDSTKPAVVYFKDRTHKGCLRGSVNLRRPQALCGPLSFGCSTFDANWRIRDSSLLHGSWLKNFSTSYSTCSSAGAAHAVSFDGSPPDEQLANSSFSPDPTTVDGKPLKMLSGSCYLPHPDKEETGGEDAHFICTDEQAIGVADGVGGWADVGVNAGLFARELISNSVRAIQEEPKGSFNPTRVLEKAHSNTRAKGSSTACIVALTDKGLHAINLGDSGFIVVRDGCTIFQSPFQQHDFNFTYQLESGNGADLPSSGEVFTIPVASGDVVIAGTDGLFDNLYNSEITAVVVHAIRAGLEPQVTAQKIAALARQRALDTSRPTPFSTAAQEAGFRYYGGKLDDITVVVSYISGSVSK 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01855 445 PANTHER PROTEIN PHOSPHATASE 2C 182 440 IPR039123 -
Pumo8g01855 445 SMART PP2C_4 190 437 IPR001932 -
Pumo8g01855 445 MobiDBLite consensus disorder prediction 172 192 - -
Pumo8g01855 445 FunFam 5-azacytidine resistance protein azr1 208 333 - -
Pumo8g01855 445 MobiDBLite consensus disorder prediction 176 190 - -
Pumo8g01855 445 Gene3D - 334 444 IPR036457 -
Pumo8g01855 445 SMART PP2C_SIG_2 199 439 IPR001932 -
Pumo8g01855 445 Gene3D - 210 333 IPR036457 -
Pumo8g01855 445 ProSiteProfiles PPM-type phosphatase domain profile. 200 439 IPR001932 -
Pumo8g01855 445 Pfam Stage II sporulation protein E (SpoIIE) 227 437 IPR001932 -
Pumo8g01855 445 SUPERFAMILY PP2C-like 203 437 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01855 Pumo-Chr8 54869006 54872872 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01855 K17508 - gmx:100785804 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01855 8 54869006 54872872 Pumo8g01855 8 54869006 54872872 ECH
Pumo4g02095 4 29834180 29837756 Pumo8g01855 8 54869006 54872872 ECH
Pumo8g01855 8 54869006 54872872 Pumo4g02095 4 29834180 29837756 PCT