Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01832 ATGGGTCTTCTGAGCATCATCAGGAAAATCAAGCGGAAAGAGAAGGAAATGCGAATTCTGATGTTGTTGTTATGCAGCGGATTGGACAATTCTGGGAAAACCACAATCGTTTTAAAGATAAACGGAGAGGACACTAGCGTCATTAGTCCCACGCTCGGCTTCAACATCAAAACCATAACTTACCAAAAGTACACCCTAAATATATGGGATGTTGGGGGCCAGAAAACAATAAGATCTTACTGGAGAAACTACTTTGAGCAAACAGATGGCTTGGTTTGGGTAGTTGACAGTTCAGATCTGAGAAGGTTGGATGATTGCAAATTGGAGCTGGATAACCTTCTTAAGGAAGAGAGGCTATCTGGAGCATCCTTACTGATACTAGCAAATAAACAGGACATAAAAGGTGCTCTTACCCCTGAAGAAATAGCTAAGGTGCTGAATTTGGAAGCCATGGATAAATCTCGGCATTGGCAGATAGTTGGCTGTAGCGCATACACTGGTGAGGGTCTGCTTGAGGGGTTTGATTGGTTGGTCCAGGACATAGCCTCTAGAATCTACATGCTTGACTGA 570 0.4333 MGLLSIIRKIKRKEKEMRILMLLLCSGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKLELDNLLKEERLSGASLLILANKQDIKGALTPEEIAKVLNLEAMDKSRHWQIVGCSAYTGEGLLEGFDWLVQDIASRIYMLD 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01832 189 PANTHER ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-RELATED 1 181 IPR044612 GO:0003924
Pumo8g01832 189 FunFam ADP-ribosylation factor-like 2, arl2 4 186 - -
Pumo8g01832 189 Gene3D - 5 186 IPR027417 -
Pumo8g01832 189 ProSiteProfiles small GTPase Arf family profile. 10 181 - -
Pumo8g01832 189 NCBIfam small GTP-binding protein domain 27 154 IPR005225 GO:0005525
Pumo8g01832 189 PRINTS GTP-binding SAR1 protein signature 77 102 IPR006689 GO:0003924|GO:0005525
Pumo8g01832 189 PRINTS GTP-binding SAR1 protein signature 155 179 IPR006689 GO:0003924|GO:0005525
Pumo8g01832 189 PRINTS GTP-binding SAR1 protein signature 50 74 IPR006689 GO:0003924|GO:0005525
Pumo8g01832 189 PRINTS GTP-binding SAR1 protein signature 22 45 IPR006689 GO:0003924|GO:0005525
Pumo8g01832 189 CDD Arl2 3 180 IPR045873 GO:0003924
Pumo8g01832 189 SMART sar_sub_1 3 181 IPR006689 GO:0003924|GO:0005525
Pumo8g01832 189 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 183 IPR027417 -
Pumo8g01832 189 SMART arf_sub_2 1 185 - -
Pumo8g01832 189 Pfam ADP-ribosylation factor family 4 181 IPR006689 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01832 Pumo-Chr8 54578794 54581011 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01832 K07943 - gmx:100305563 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01832 8 54578794 54581011 Pumo8g01832 8 54578794 54581011 ECH